Sophie

Sophie

distrib > Fedora > 14 > x86_64 > media > updates > by-pkgid > 2f8321c8e2a11ea8b160a642cfc9fd7f > files > 238

towhee-doc-7.0.1-1.fc14.noarch.rpm

<html>
 <head>
  <title>MCCCS Towhee (input_style 'nanotube builder')</title>
 </head>

 <body bgcolor="#FFFFFF" text="#000000">
  <table width="800" border="0" cellspacing="0" cellpadding="0" height="590">
   <tr> 
    <td colspan="2" height="29"> 
     <div align="center"> <font size="5"> <b><font face="Arial, Helvetica, sans-serif"><a name="top">
      </a>MCCCS Towhee (input_style 'nanotube builder')</font></b> </font>
     </div>
    </td>
   </tr>
   <A href="http://sourceforge.net"> 
    <IMG src="http://sourceforge.net/sflogo.php?group_id=87039&amp;type=5" width="210" height="62" border="0" alt="SourceForge.net Logo" align="right"/>
   </A>
   <tr> 
    <td width="18" height="371" valign="top"> 
      <p>&nbsp; </p>
      <p>&nbsp;</p>
    </td>

    <td width="700" valign="top"> 
     This section describes the input variables associated with an <b>input_style</b> setting of 'nanotube builder'.
     Uses the nanotube builder functionallity to set up the data structures and an initial conformation for carbon nanotubes from the traditional
     (m,n) nanotube chiral vector notation.
     <p>&nbsp;</p>

     <dt><a name="forcefield"><b>forcefield (character*10)</b></a>
      <ul>
       <li> The forcefield that you want to use to build this molecule.</li>
      </ul>
     </dt>

     <dt><a name="atomname"><b>atomname (character*6)</b></a>
      <ul>
       <li> Atom type for the building block of the nanotube.  The atomnames can be found in the documentation for the forcefield of interest.</li>
      </ul>
     </dt>

     <dt><a name="qqatom"><b>qqatom (double precision)</b></a>
      <ul>
       <li>The atomic charge on each atom of the nanotube.</li>
      </ul>
     </dt>

     <dt><a name="nanotube_n"><b>nanotube_n (integer)</b></a>
      <ul>
       <li>The n index of the (n,m) chiral vector describing nanotube geometry.</li>
      </ul>
     </dt>

     <dt><a name="nanotube_m"><b>nanotube_m (integer)</b></a>
      <ul>
       <li>The m index of the (n,m) chiral vector describing nanotube geometry.</li>
      </ul>
     </dt>

     <dt><a name="nanotube_ncells"><b>nanotube_ncells (integer)</b></a>
      <ul>
       <li>The number of repeat cells to create for the nanotube.  Must be positive.</li>
      </ul>
     </dt>

     <dt><a name="nanotube_bondlength"><b>nanotube_bondlength (double precision)</b></a>
      <ul>
       <li>The atom bond length used to create the initial structure.</li>
      </ul>
     </dt>

     <a href="../index.html">Return to the main towhee web page</a> 
     <p>&nbsp;</p>
    </td>
   </tr>
  </table>

  <hr width="715" align="left"></hr>
  <i><font size="2">Send comments to:
  </font></i> <font size="2"><a href="mailto:marcus_martin@users.sourceforge.net">Marcus G. Martin</a>
   <br></br>
   <i>Last updated:</i> <!-- #BeginDate format:Am1 -->Decemer 22, 2006<!-- #EndDate -->
  </font>
  <br></br>
 </body>
</html>