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chemical-mime-data-0.1.94-14.mga7.noarch.rpm

# Document  $Id: ChangeLog,v 1.98 2007/02/05 00:36:55 dleidert Exp $
# Summary   File changelog for the chemical-mime-data project.

2007-02-04 Daniel Leidert <daniel.leidert@wgdd.de>

	* NEWS: Final 0.1.94 release.

2007-02-04 Daniel Leidert <daniel.leidert@wgdd.de>

	* html_docs/Makefile.am (install-sfnet): Fixed pre-requisite.

2007-02-04 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in (chemical/x-cactvs-binary)
	(chemical/x-cdx, chemical/x-gamess-output, chemical/x-gcg8-sequence)
	(chemical/x-kinemage, chemical/x-ncbi-asn1): Improved magic pattern.
	Newlines abd byte-sequences have been replaced by appropriate code.

2007-02-02 Daniel Leidert <daniel.leidert@wgdd.de>

	* THANKS: Updated. Added dedication to CambridgeSoft Technical
	Support.

	* chemical-mime-data.pc.in: Added some more stuff and a header.
	(exec_prefix, libdir, includedir, Libs, Cflags): Removed (see
	https://bugzilla.redhat.com/bugzilla/show_bug.cgi?id=225095). Thanks
	to Ville Skyttä and Julian Sikorski (closes RH #225095 and sf.net
	#1616568).

	* configure.ac: Check, if PKG_CHECK_EXISTS is defined and make a safe
	fallback if not. This fixes a compilation issue with older intltool
	versions and hardens the configure script. Further define several
	locations, if they were not defined via autoconf (necessary for the
	pkg-config file).

	* html_docs/Makefile.am (htmldocsdir, htmldocs_DATA)
	(dist_htmldocs_DATA): Changed to use htmldir, that can be changed by
	the user with the --htmldir configure option (autoconf 2.60).

	* po/Makevars: Added builddir variable to make intltool-* tools stop
	complaining.

2007-01-29 Daniel Leidert <daniel.leidert@wgdd.de>

	* html_docs/Makefile.am (EXTRA_DIST, htmldocs_DATA):
	* icons/pixmaps/Makefile.am (EXTRA_DIST, pixmaps_list)
	(pixmaps_DATA): Changed to use dist_ prefix. Makes the files smaller.

2007-01-29 Daniel Leidert <daniel.leidert@wgdd.de>

	* html_docs/index.html: Improved markup.

2007-01-29 Daniel Leidert <daniel.leidert@wgdd.de>

	* html_docs/index.html: Added missing acronym/abbreviation tags.

2007-01-29 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in: Initially added (currently not
	activated) application/x-chemtool, application/x-ghemical,
	chemical/x-turbomole-basis, chemical/x-turbomole-control,
	chemical/x-turbomole-coord, chemical/x-turbomole-grad,
	chemical/x-turbomole-input, chemical/x-turbomole-jbas,
	chemical/x-turbomole-scfmo and chemical/x-turbomole-vibrational MIME
	types.
	(chemical/x-gaussian-input): Added more specific specification URL.
	(chemical/x-inchi, chemical/x-inchi-xml): Added specification URL.
	(chemical/x-inchi-xml): Added some magic.
	(chemical/x-pdb): Added specification URL and removed a useless one.
	(chemical/x-xyz): Added some specification URL with a short format
	explanation.

2007-01-28 Daniel Leidert <daniel.leidert@wgdd.de>

	* TODO: Updated.

	* src/chemical-mime-database.xml.in (chemical/x-fasta): Added magic
	pattern and specification URL.
	(chemical/x-embl-dl-nucleotide): Added specification URL.
	(chemical/x-genbank): Fixed detection rules based on specification
	from www.psc.edu.

2007-01-28 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in (chemical/x-daylight-smiles):
	Fixed specification URL.

2007-01-28 Daniel Leidert <daniel.leidert@wgdd.de>

	* HACKING: Fixed typo.

	* html_docs/Makefile.am (install-sfnet): Fixed typo.

2007-01-28 Daniel Leidert <daniel.leidert@wgdd.de>

	* Makefile.am:
	* html_docs/Makefile.am: Added a target install-sfnet to copy the
	files to sourceforge.net via scp.

	* freedesktop.org/Makefile.am (vpath, chemical-mime-data.xml):
	* gnome/Makefile.am (vpath, chemical-mime-data.keys)
	(chemical-mime-data.mime):
	* html_docs/Makefile.am (vpath, chemical-mime-data.html):
	* kde/Makefile.am (vpath, *.desktop): Replaced vpath directives with
	VPATH variables. Removed GNU make text processing functions to avoid
	portability warnings. Removed the cmd_common.xsl prerequisite too, to
	allow the last step.

	* icons/hicolor/Makefile.am (.svgz): Moved over to an old-fashioned
	suffix rule to avoid portability warnings.

	* src/Makefile.am (check-local): Moved GNU make control functions to
	simple echo calls to avoid portability warnings.

2007-01-28 Daniel Leidert <daniel.leidert@wgdd.de>

	* README:
	* html_docs/index.html: Synced both files. Added and completed
	content.

	* TODO: Removed README related item.

2007-01-27 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in: Initially added (currently not
	activated) chemical/x-fasta and chemical/x-mopac-vib.
	(chemical/seq-aa-fasta, chemical/seq-na-fasta): Moved the generic
	extensions to the chemical/x-fasta MIME type.
	(chemical/x-cerius): Added missing conflicts to
	application/x-x509-ca-cert.

	* xsl/cmd_website.xsl: Added a template html.content.references to add
	references links to the tabled overview.
	(html.content.head): Added an overview of the different sections for
	easier navigation.
	(html.content.table.mime.supported)
	(html.content.table.mime.unsupported): Added IDs for h2 tags.

2007-01-27 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in: Initially added (currently
	not activated) chemical/seq-aa-fasta, chemical/seq-aa-genpept,
	chemical/seq-na-fasta.
	(chemical/x-genbank): Added alias and specification URL for the alias.

	* xsl/cmd_website.xsl (chemical-mime): Changed to filename without the
	leading `./'.
	(html.content.table.mime.unsupported): Fixed sorting.

2007-01-27 Daniel Leidert <daniel.leidert@wgdd.de>

	* README: Updated and completed.

	* html_docs/index.html: Ditto. This seems to be a first complete
	proposal.

2007-01-27 Daniel Leidert <daniel.leidert@wgdd.de>

	* HACKING: Completed content.

	* NEWS: Completed for the 0.1.94 release.

	* TODO: Removed HACKING item.

2007-01-27 Daniel Leidert <daniel.leidert@wgdd.de>

	* xsl/cmd_common.xsl: Renamed exslt extension prefix accordingly to
	http://www.exslt.org/exsl/elements/document/index.html.
	* xsl/cmd_website.xsl: Removed exslt extension (prefix).

2007-01-27 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in (chemical/x-cxf): Improved
	description wording.

2007-01-27 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in (chemical/x-compass): Improved
	wording.
	(chemical/x-csml): Added acronym/expanded-acronym combination for
	CSML.

2007-01-27 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in: Removed all empty icon tags after
	fixing the DTD and the stylesheets. Added the following currently
	not activated MIME types: chemical/x-chemdraw, chemical/x-compass,
	chemical/x-crossfire, chemical/x-csml, chemical/x-cxf,
	chemical/x-embl-dl-nucleotide, chemical/x-galactic-spc,
	chemical/x-gaussian-checkpoint, chemical/x-gaussian-cube,
	chemical/x-gcg8-sequence, chemical/x-isostar, chemical/x-kinemage,
	chemical/x-macmolecule, chemical/x-mif, chemical/x-molconn-Z,
	chemical/x-rosdal, chemical/x-swissprot, chemical/x-vamas-iso14976 and
	chemical/x-xtel.
	(conflicts): Added an fdo attribute for conflicts with the fd.o
	database.
	(specification): Renamed the resource attribute to title.
	(chemical/x-cache, chemical/x-cache-csf): Moved (alphabetical order).
	(chemical/x-cif, chemical/x-mmcif): Removed unused spec-links.
	(chemical/x-genbank): Added magic pattern found in spec.
	(chemical/x-mol2): Added two file extensions found via WWW search.
	(chemical/x-test): Extended test entry.

	* xsl/cmd_freedesktop_org.xsl (chemical-mime): Fixed XPath expression
	introduced by the earlier change (revision 1.8), that now lead to a
	broken (almost empty) shared-mime-info database file.

	* xsl/cmd_website.xsl (specification): Fixed after DTD change.
	(html.content.table.mime.unsupported): Improved wording.

2007-01-26 Daniel Leidert <daniel.leidert@wgdd.de>

	* html_docs/cmd.css: Added some styling for h2 and tr tags.
	(table, td, th): Improved border styling.
	(td, th): Improved space to border.

2007-01-26 Daniel Leidert <daniel.leidert@wgdd.de>

	* AUTHORS: Just fixed the file description.

	* README: Removed a useless space.

2007-01-26 Daniel Leidert <daniel.leidert@wgdd.de>

	* xsl/cmd_common.xsl:
	* xsl/cmd_freedesktop_org.xsl:
	* xsl/cmd_gnome-keys.xsl:
	* xsl/cmd_gnome-mime.xsl:
	* xsl/cmd_kde.xsl: Added a lot of comments for a better internal
	documentation.

	* xsl/cmd_common.xsl: (xmlns:xalanredirect)
	(extension-element-prefixes): Changed xalanredirect namespace and
	prefix to make the spec at
	http://xml.apache.org/xalan-j/apidocs/org/apache/xalan/lib/Redirect.html.
	(header.desktop): Moved to xsl/cmd_kde.xsl (and renamed to
	kde.desktop.header).
	(header.text, header.xml): Renamed to common.header.text and
	common.header.xml.
	(write.chunk): Renamed to common.write.chunk. Adjusted xalanredirect
	prefix.

	* xsl/cmd_freedesktop_org.xsl (chemical-mime):
	* xsl/cmd_gnome-keys.xsl (chemical-mime):
	* xsl/cmd_gnome-mime.xsl (chemical-mime):
	* xsl/cmd_kde.xsl (chemical-mime):
	* xsl/cmd_website.xsl (chemical-mime): Adjusted common template names
	after changes to xsl/cmd_common.xsl.

	* xsl/cmd_freedesktop_org.xsl (chemical-mime, mime-type):
	* xsl/cmd_gnome-keys.xsl (chemical-mime, mime-type):
	* xsl/cmd_gnome-mime.xsl (chemical-mime, mime-type):
	* xsl/cmd_kde.xsl (chemical-mime, mime-type): Improved selection of
	"supported" nodes, so this stuff could be removed in the mime-type
	template.

	* xsl/cmd_gnome-keys.xsl (mime-type):
	* xsl/cmd_kde.xsl (mime-type): Added a call to gnome.keys.generic.icon
	respectively kde.desktop.generic.icon and the related template to
	handle the case, if no icon node was found.

	* xsl/cmd_gnome-keys.xsl (comment):
	* xsl/cmd_kde.xsl (comment): Improved the template to use a simple
	xsl:if instead of xsl:choose.

	* xsl/cmd_kde.xsl: Added kde.desktop.header template (formerly:
	desktop.header template in xsl/cmd_common.xsl).
	(mime-type, glob): Improved glob template. Instead of xsl:for-each we
	now use a matching template, that outputs the pattern in alphabetical
	order.

	* xsl/cmd_website.xsl (mime-type, html.content.table.mime.head): Added
	some class attributes for CSS styling.

2007-01-15 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in (chemical/x-cactvs-ascii)
	(chemical/x-cactvs-binary, chemical/x-cactvs-table): Added
	acronym/expanded-acronym combination for CACTVS.
	(chemical/x-cerius): Ditto for MSI.
	(chemical/x-mdl-rxnfile): Ditto for 2D.
	(chemical/x-inchi, chemical/x-inchi-xml, chemical/x-ncbi-asn1): Re-
	ordered acronyms in alphabetical order.

2007-01-15 Daniel Leidert <daniel.leidert@wgdd.de>

	* html_docs/cmd.css: Added style pattern to have a fixed footer for
	the footnote(s). Reorganized the selectors in alphabetical order.

	* xsl/cmd_website.xsl (html.content): Added container around content
	and footer to allow introduced styling.
	(html.content.foot): The border is now realized via CSS. Improved
	space usage.

2007-01-14 Daniel Leidert <daniel.leidert@wgdd.de>

	* xsl/cmd_website.xsl (html.content.table.mime.head): Improved table
	header cell content.

2007-01-14 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in (specification): Added a resource
	attribute to comment a specification.

	* xsl/cmd_website.xsl: Added documentation to most templates.
	Reorganized the templates, renamed a lot of them and outsourced
	several parts to own templates. Added a new html.content.foot template
	for footnotes.
	(chemical-mime): Outsourced HTML content creation into new
	html.content template.
	(comment): Adjusted after changes to comment.acronym.check (ex:
	comment.acronym.replace) and comment.acronym.no.replace (ex:
	comment.acronym.no.replace).
	(glob, specification): Improved and shorter.
	(mime-type): Adjusted after renaming mime.type template.
	(specification): Added support for newly introduced resource
	attribute.
	(header.html): Renamed to html.content.head.
	(table.mime.supported): Renamed to html.content.table.mime.supported.
	(table.mime.unsupported): Renamed to
	html.content.table.mime.unsupported.
	(table.mime.header): Renamed to html.content.table.mime.head. Added
	alias and sub-class-of headers to table header cell.
	(comment.acronym.replace): Renamed to comment.acronym.check. Rewritten
	template - now it always checks the whole comment content for
	(expanded-)acronam matches and "adds" acronym tags to it's content
	instead of just giving the right-of-match content to the new template
	call. So we really check the whole comment content for matches.
	(comment.acronym.no.replace): Renamed to comment.acronym.output.
	Adjusted after changes to comment.acronym.check (ex:
	comment.acronym.replace).
	(mime.type): Renamed to mimetype.output.

2007-01-07 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in (chemical/x-msi-mdf): Fixed
	sub-class-of value.

2007-01-07 Daniel Leidert <daniel.leidert@wgdd.de>

	* html_docs/Makefile.am (htmldocsdir): Fixed bug.

2007-01-07 Daniel Leidert <daniel.leidert@wgdd.de>

	* xsl/cmd_website.xsl (mime.type): Moved processing of alias and
	sub-class-of into an own matching template.

2007-01-07 Daniel Leidert <daniel.leidert@wgdd.de>

	* html_docs/cmd.css: Added span.alias, span.mime-type and
	span.sub-class-of styling for the newly introduced fields at output.
	(td.mime-type): Removed in favour of span.mime-type.

	* src/chemical-mime-database.xml.in (chemical/x-inchi-xml): Fixed
	sub-class of value.

	* xsl/cmd_website.xsl (mime-type): Outsourced mime-type table cell
	creation to new mime.type template, which also adds support for
	sub-class-of and alias content.

2007-01-07 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in: Initially added
	application/x-xdrawchem without activating it. Set pattern priority
	for most MIME types (except conflicting ones) to 50 (default).
	(chemical/x-gaussian-input): Commented .com extension for the moment
	until we have magic pattern.
	(chemical/x-hin): Improved pattern.
	(chemical/x-pdb): Commented .ent extension as it conflicts with
	entitity definition files (and we don't want to open such files with
	chemical applications).

2007-01-07 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in (chemical/x-cmtx)
	(chemical/x-shelx): Fixed pattern (forgot to count the newline).

2007-01-07 Daniel Leidert <daniel.leidert@wgdd.de>

	* html_docs/cmd.css: Added a border between MIME types. Increased
	space to table cell borders.

	* src/chemical-mime-database.xml.in: Added (currently unsupported)
	chemical/x-cmdf, chemical/x-cmmf and chemical/x-cmtx MIME types.
	(chemical/x-cerius): Fixed description.
	(chemical/x-shelx): Improved pattern to not conflict with
	chemical/x-cmtx.

	* xsl/cmd_website.xsl (mime-type): Added a class attribute to the
	first tr tag, to allow a border.

2007-01-07 Daniel Leidert <daniel.leidert@wgdd.de>

	* NEWS: Prepared for release 0.1.94.

	* src/chemical-mime-database.xml.in (chemical/x-cache)
	(chemical/x-cache-csf): Added an acronym/expanded-acronym combination
	for the CAChe acronym.

2007-01-06 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in: Added chemical/x-cerius and
	chemical/x-ctx initially, but didn't activate it yet.
	(chemical/x-cml): Added some magic pattern.
	(chemical/x-genbank): Added acronym/expanded-acronym combination for
	GenBank abbreviation.
	(chemical/x-gulp-input, chemical/x-gulp): Improved wording.
	(chemical/x-msi-car): Removed .cor extension for the moment. Added
	magic patter and specification resources.
	(chemical/x-msi-hessian): Added .hessianx and .xhessian extensions.
	Added magic patter and specification resources.
	(chemical/x-msi-mdf): Fixed sub-class-of. Added magic pattern and
	specification resources.
	(chemical/x-msi-msi): Added magic patter and specification resources.
	(chemical/x-vmd): Added specification resource.

2007-01-06 Daniel Leidert <daniel.leidert@wgdd.de>

	* NEWS: Prepared for release 0.1.94.

	* TODO: Updated.

2007-01-06 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in (chemical/x-inchi)
	(chemical/x-inchi-xml): Added an acronym/expanded-acronym combination
	for IUPAC.

	* xsl/cmd_website.xsl (comment.acronym.replace): Added a routine to
	add an acronym /tag) directly behind a found expanded-acronym
	substring. Added a few comments to explain, what we do.

2007-01-06 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in: Added copyright notice. Added a
	comment for the root-XML element.
	(chemical/x-cactvs-ascii, chemical/x-ncbi-asn1)
	(chemical/x-ncbi-asn1-binary, chemical/x-ncbi-asn1-xml): Added some
	acronym/expanded-acronym combinations for ASCII, ASN.1 and XML
	acronyms.

2007-01-06 Daniel Leidert <daniel.leidert@wgdd.de>

	* Makefile.am: Updated copyright notice.
	(SUBDIRS): Added the html_docs directory, that contains the HTML
	(build) files.

	* configure.ac: Updated copyright notice.
	(AC_CONFIG_FILES): Added html_docs/Makefile and xsl/cmd_entities.dtd.

	* src/Makefile.am: Updated copyright notice.

	* src/chemical-mime-database.xml.in: Changed mime-type element
	definition  bit, so that an acronym requires an expanded acronym
	element. Makes the life easier. Changed the attribute list default of
	the conflicts element, so that we have less work when writing this
	element.
	(chemical/x-genbank): Added pattern and specification found recently.
	(chemical/x-mol2, chemical/x-ncbi-asn1): Added some specification URLs
	I found.
	(chemical/x-gulp-input, chemical/x-mopac-input, chemical/x-msi-car):
	Changed conflicts element according to it's DTD change.

	* xsl/Makefile.am: Updated copyright notice.
	(EXTRA_DIST, DISTCLEANFILES): Added newly introduced files
	cmd_website.xsl and cmd_entities.dtd(.in).

	* xsl/cmd_common.xsl: Updated copyright notice. Changed exsl namespace
	prefix to exslt. Added missing newline at the end of the file.

	* xsl/cmd_freedesktop_org.xsl: Updated copyright notice.

	* xsl/cmd_gnome-keys.xsl: Ditto. Added missing newline at the end of
	the file.

	* xsl/cmd_gnome-mime.xsl: Ditto.

	* xsl/cmd_kde.xsl: Ditto.

	* xsl/cmd_website.xsl:
	* xsl/cmd_entities.dtd.in:
	* html_docs/Makefile.am:
	* html_docs/cmd.css:
	* html_docs/index.html: Added to create the HTML files of the project
	- the projects homepage and a large table with the information of the
	database.

2007-01-06 Daniel Leidert <daniel.leidert@wgdd.de>

	* freedesktop.org/Makefile.am: Updated copyright notice.
	(freedesktopmimedir): Changed to use the variable directly.
	(install-data-hook, uninstall-hook): Fixed update-mime-database
	command line. Thanks to Jean Bréfort for reporting this issue.

	* kde/Makefile.am: Updated copyright notice.
	(kdemimedir): Changed to use the variable directly.

	* gnome/Makefile.am: Ditto.
	(gnomemimedir): Ditto.

	* icons/pixmaps/Makefile.am: Ditto.
	(pixmapsdir): Ditto.

	* icons/hicolor/Makefile.am: Ditto.
	(hicolorthemedir, install-data-local, uninstall-hook): Ditto.

2007-01-05 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in (chemical/x-gamess-output): Fixed
	magic pattern. Now all test files work.
	(chemical/x-gaussian-log): Just added a comment about the limitation
	of this pattern.

2007-01-05 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in(chemical/x-gamess-output)
	(chemical/x-gaussian-log): Removed the .log extension that leads to a
	conflict with the text/x-log MIME type.

2007-01-03 Daniel Leidert <daniel.leidert@wgdd.de>

	* README: Updated copyright.

2007-01-03 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in: Added an entry as test case for
	pattern detection rules.

2007-01-03 Daniel Leidert <daniel.leidert@wgdd.de>

	* AUTHORS: Added some alternative mail addresses.
	
	* ChangeLog: Fixed my mail address.

	* po/ChangeLog: Ditto.

	* src/chemical-mime-database.xml.in: Cosmetic fix for ID.

2007-01-03 Daniel Leidert <daniel.leidert@wgdd.de>

	* NEWS: Prepared for release 0.1.94.

2007-01-03 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in: Removed the obsolete comments.
	(mime-type): Fixed DTD. The freedesktop.org mime-info doctype allows
	more than one root-XML element. Added currently not activated
	chemical/x-cache-csf, chemical/x-macromodel-output,
	chemical/x-qchem-input and chemical/x-qchem-output. Added
	chemical/x-gamess-output and chemical/x-ncbi-asn1-xml. Cosmetic
	changes.
	(chemical/x-cactvs-ascii): Improved magic pattern. Thanks to Wolf-D.
	Ihlenfeldt.
	(chemical/x-cdx): Improved magic pattern by adding a second defined 16
	Byte search string.
	(chemical/x-cml): Added CML1 namespace.
	(chemical/x-dmol): Added missing .dmol extension.
	(chemical/x-gamess-input): Removed .gam extension (belongs to
	chemical/x-gamess-output MIME type). Added magic pattern.
	(chemical/x-gaussian-input): Added .com extension (found at
	OpenBabel). Fixed specification URL.
	(chemical/x-gaussian-log): Added missing .gxx and .log extensions.
	Added rarely used MIME type aliases. Added a common magic string.
	Added specification URL.
	(chemical/x-gulp): Found one more extension. Currently not activated,
	because of unknown usage.
	(chemical/x-hin): Added missing magic priority.
	(chemical/x-mol2): Added magic pattern.
	(chemical/x-pdb): Added missing .ent extension.
	(chemical/x-shelx): Added missing .ins extension. Added magic pattern.

2007-01-02 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in: Cosmetic changes.

2007-01-02 Daniel Leidert <daniel.leidert@wgdd.de>

	* NEWS: Prepared for release 0.1.94.

	* src/chemical-mime-database.xml.in (chemical/x-mdl-sdfile): Added
	conflicts element for application/vnd.stardivision.math MIME type.
	(chemical/x-mopac-input): Added conflicts for audio/x-musepack and
	video/mpeg MIME types.
	(chemical/x-msi-car): Added conflicts for application/x-arc MIME type.

2007-01-02 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in (chemical/x-cactvs-ascii): Support
	activated. Magic pattern fixed.

2007-01-01 Daniel Leidert <daniel.leidert@wgdd.de>

	* THANKS: Updated.

2007-01-01 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in: Added chemical/x-cactvs-ascii,
	chemical/x-cactvs-binary and chemical/x-cactvs-table MIME types.
	Thanks to Wolf-D. Ihlenfeldt. Added CACTVS applications that support
	our MIME types (based on
	http://www2.chemie.uni-erlangen.de/software/cactvs/mime.html). Small
	cleanups to the database.
	(chemical/x-ncbi-asn1-binary): Fixed the magic pattern. But I fear,
	it's still not perfect.

2006-12-30 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in: Made all acronym and
	expanded-acronym elements untranslatable. The acronyms used here are
	only hardly translatable, so we let it be.
	(chemical/x-cdx, chemical/x-cdxml): Improved MIME type description.

2006-12-30 Daniel Leidert <daniel.leidert@wgdd.de>

	* autogen.sh: Fixed a typo.
	(AUTOMAKE_FILES): Define list depending on the automake version.

	* configure.ac: Fixed description of `--with-pixmaps' option. Replaced
	`--with-gnome-theme' with the more appropriate `--with-hicolor-theme'
	option. The latter also changed all relevant variables. Further
	removed the `--with-kde-theme' option. This option is obsolete with
	these changes.
	(AM_INIT_AUTOMAKE): Fixed macro usage. Providing AC_PACKAGE_ variables
	to this macro is obsolete.
	(KDE_CONFIG, with_kde_mime): Improved path search by using
	`kde-config'.
	(BOOL_*): Fixed/improved boolean variables.
	(AC_CONFIG_FILES): Removed icons/crystalsvg/Makefile, that was
	removed.

	* icons/hicolor/Makefile.am:
	* icons/pixmaps/Makefile.am: Changed theme related variables
	accordingly to the changes in configure.ac.

	* icons/Makefile.am (SUBDIRS):
	* icons/crystalsvg/Makefile.am:
	* icons/crystalsvg/chemistry.svg:
	* icons/pixmaps/Makefile.am (pixmaps_list):
	* icons/pixmaps/chemistry.png: The crystalsvg directory was completely
	removed from the package. Instead only the desktop-neutral places for
	theme and on-theme icons are used. So a raster image for the KDE 3
	.desktop files is installed into non-theme icons for the moment.

	* src/chemical-mime-database.xml.in: Fixed an issue in the mime-type
	element definition. sub-class-of may not appear. Added
	chemical/x-cdxml, chemical/x-ncbi-asn1 and
	chemical/x-ncbi-asn1-binary.
	(chemical/x-cdx): Added magic pattern based on the format description
	at cambridgesoft.com.
	(chemical/x-cif): Added magic pattern based on the CIF 1.1 format
	specification.

2006-12-15 Daniel Leidert <daniel.leidert@wgdd.de>

	* autogen.sh: Removed automake version check and added it to
	Makefile.am.

	* Makefile.am (AUTOMAKE_OPTIONS): Added automake version check.

2006-09-05 Daniel Leidert <daniel.leidert@wgdd.de>

	* autogen.sh: Many updates for a better usability.

	* configure.ac: Replaced `echo' calls with the related `AC_MSG_*'
	macros. Fixed usage of `AC_ARG_*' macros.
	(ENABLE_UPDATEDB, ENABLE_CONVERT, DIR_FDMIME, DIR_GNOMEMIME)
	(DIR_PIXMAPS, DIR_GNOMETHEME, DIR_KDEMIME, DIR_KDETHEME): Replaced
	custom variables with it's automatically assigned equivalent variables
	`enable_*' and `with_*'. Alle relevant tests have been adjusted.
	(CONVERT, RSVG, UPDATE_MIME_DATABASE): Changed the return value if
	determination failed to `no'. All relevant tests have been adjusted.

	* freedesktop.org/Makefile.am (fdomimedir, fdomime_DATA, CLEANFILES):
	Renamed fdomime{dir,_DATA} to freedesktopmime{dir,_DATA}.
	(freedesktopmimedir): Changed the variable name, that holds the
	installation path (see configure.ac changes).
	(install-data-hook, uninstall-hook): Ditto.

	* gnome/Makefile.am (gnomemimedir): Ditto.

	* icons/crystalsvg/Makefile.am (kdethemedir, install-data-local)
	(uninstall-hook): Ditto.

	* icons/hicolor/Makefile.am (gnomethemedir, install-data-local)
	(uninstall-hook): Ditto.

	* icons/pixmaps/Makefile.am (pixmapsdir): Ditto.

	* kde/Makefile.am (kdemimedir): Ditto.

	* src/chemical-mime-database.xml.in: Added chemical/x-gulp support.
	Added chemical/x-gulp-input, which is not completely supported yet.

	* xsl/cmd_freedesktop_org.xsl: Added missing newline at the end of the
	file.
	(mime-type): Cosmetic fix.

	* README: Typo fixed.

2006-06-15 Daniel Leidert <daniel.leidert@wgdd.de>

	* ABOUT-NLS: Removed.

2006-06-15 Daniel Leidert <daniel.leidert@wgdd.de>

	* configure.ac: Fixed usage of AM_PO_SUBDIRS. It is necessary in every
	case to create po/Makefile.

2006-06-15 Daniel Leidert <daniel.leidert@wgdd.de>

	* Makefile.am (AUTOMAKE_OPTIONS): Added check-news option.
	(MAINTAINERCLEANFILES): Removing .md5 sums too. Using a shorter
	expression for the archives.
	(DISTCHECK_CONFIGURE_FLAGS): Added the --disable-nls option.

	* NEWS: Added an entry for the post release version bump to version
	0.1.94 to fit new check-news option.

	* configure.ac: intltool fixed several issues in the latest 0.35.0
	release. Now it uses AM_PO_SUBDIRS instead of AM_GNU_GETTEXT([..])
	(http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=365727). Some more
	changes added because of intltools latest release. Added the
	AC_CONFIG_SRCDIR macro.

	* freedesktop.org/Makefile.am (install-data-hook)
	(uninstall-hook): Fixed the path expression, so 'make install' no
	longer fails in the special case of using the DESTDIR variable as user
	without the rights to write to $datadir/mime.

	* po/Makevars: Added MSGID_BUGS_ADDRESS variable.

	* xsl/cmd_common.xsl: Just a few cosmetic fixes for the formatting.

2006-05-19 Daniel Leidert <daniel.leidert@wgdd.de>

	* configure.ac (AC_PACKAGE_VERSION): Post-release version bump to
	0.1.94.

	* Makefile.am (MAINTAINERCLEANFILES): Just a cosmetic change (more
	general expression).

2006-05-19 Daniel Leidert <daniel.leidert@wgdd.de>

	* NEWS: Released version 0.1.93.

	* chemical-mime-data.pc.in (Requires): Small fix for a better output.

	* configure.ac (CHEMICAL_MIME_DEPS): Ditto.

	* src/chemical-mime-database.xml.in: Added comments to show up in
	gettext's po files. Added InChI and JCAMP acronym.

2006-05-19 Daniel Leidert <daniel.leidert@wgdd.de>

	* Fixed CVS repository content to get the state before sf.net
	CVS service crashed.

2006-05-09 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in (chemical/x-genbank): Added
	missing conflicts information.

2006-05-08 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in: Added more comments to the DTD
	for a better description of their usage.

2006-05-08 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in: Removing useless spaces and tabs
	at line-ends.
	(chemical/x-genbank): Fixed an invalidity, which clashes with the DTD.

2006-05-08 Daniel Leidert <daniel.leidert@wgdd.de>

	* TODO: Removed stuff done by Jerome.

	* ChangeLog: Added missing entry for Jeromes last commit.

2006-05-08 Jerome Pansanel <j.pansanel@pansanel.net>

	* configure.ac (ALL_LINGUAS): Re-Added French to available
	translations.

	* src/chemical-mime-database.xml.in: Added chemical/x-genbank,
	chemical/x-inchi, chemical/x-inchi-xml, chemical/x-jcamp-dx,
	chemical/x-shelx, chemical/x-vmd MIME types (kfile_chemical support).
	(chemical/x-daylight-smiles): Added one missing pattern.
	(chemical/x-dmol, chemical/x-mol2): Fixed a typo in the comment.

2006-05-08 Daniel Leidert <daniel.leidert@wgdd.de>

	* TODO: Added note about KDE and GNOME MIME magic databases.

2006-05-06 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/Makefile.am (check-local): Added XMLLINT_FLAGS to command.

2006-05-06 Daniel Leidert <daniel.leidert@wgdd.de>

	* freedesktop.org/Makefile.am (chemical-mime-data.xml): Added
	cmd_common.xsl to prerequisites and fixed rule.

	* gnome/Makefile.am (chemical-mime-data.keys)
	(chemical-mime-data.mime): Ditto.

	* kde/Makefile.am (*.desktop): Ditto.

2006-05-06 Daniel Leidert <daniel.leidert@wgdd.de>

	* TODO: Just added a note about viewmol.

	* configure.ac (AM_GNU_GETTEXT, CATOBJEXT): Work around a bug in
	gettext.m4 leading to non-updateable translations.

	* xsl/cmd_kde.xsl (pattern.list): Fixed the wrong field name.

2006-05-03 Daniel Leidert <daniel.leidert@wgdd.de>

	* HACKING: Added.

	* Makefile.am (EXTRA_DIST): Ditto.

	* TODO: Improved overview and structure.

	* src/chemical-mime-database.xml.in: Changed DTD for application
	element and adjusted the usage of this element in the whole file.

2006-05-03 Daniel Leidert <daniel.leidert@wgdd.de>

	* xsl/cmd_freedesktop_org.xsl: Use the namespace attribute, not the
	xmlns attribute, for xsl:element (makes no real difference, but it is
	IMHO more common).

2006-05-03 Daniel Leidert <daniel.leidert@wgdd.de>

	* TODO: Added information pointer to gdis manual.

	* src/chemical-mime-database.xml.in: Added gdis application elements.
	(chemical/x-mopac-out): Added magic pattern and "*.out" pattern.

2006-05-03 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in (chemical/x-cif)
	(chemical/x-mmcif): Fixed acronym explanation for 'CIF'. Changed
	Comment.
	(chemical/x-mdl-molfile, chemical/x-mdl-rdfile, chemical/x-mdl-rxnfile)
	(chemical/x-mdl-sdfile, chemical/x-mdl-tgf): Added acronym and
	explanation for 'MDL'.

2006-05-03 Daniel Leidert <daniel.leidert@wgdd.de>

	* NEWS: Added items for next version 0.1.93.

	* src/chemical-mime-database.xml.in: Small DTD change to support a
	package attribute for the application element. Added support for
	chemical/x-gamess-input and chemical/x-mopac-out. Added application
	elements for xdrawchem and molden, where I missed them before, and
	initially added the application elements for gchem3d-viewer.

	* xsl/cmd_freedesktop_org.xsl: Better use the <xsl:element> element
	instead of the element to print.

2006-05-02 Daniel Leidert <daniel.leidert@wgdd.de>

	* acinclude.m4: Added MP_PROG_XMLLINT macro to make xmllint available
	for 'check' target.

	* configure.ac: Ditto.

	* src/Makefile.am: Added check target to make sure, that the resulting
	database follows our own document declaration.

2006-05-02 Daniel Leidert <daniel.leidert@wgdd.de>

	* xsl/cmd_kde.xsl: Fixed header.

2006-05-02 Daniel Leidert <daniel.leidert@wgdd.de>

	* NEWS: Fixed typo. Added a new entry for the next release.

2006-05-02 Daniel Leidert <daniel.leidert@wgdd.de>

	* configure.ac (AC_PACKAGE_VERSION): Post-release version bump to
	0.1.93.

	* Makefile.am (EXTRA_DIST): Fixed a bug. The resulting .pc file should
	not be shipped with the 'dist' target.

2006-05-02 Daniel Leidert <daniel.leidert@wgdd.de>

	* configure.ac: Bump to version 0.1.92.

	* NEWS: Ditto.

2006-05-02 Daniel Leidert <daniel.leidert@wgdd.de>

	* NEWS: Added information about latest release.

2006-05-02 Daniel Leidert <daniel.leidert@wgdd.de>

	* TODO: Fixed content. A lot of notes were removed, because I already
	solved them.

2006-05-02 Daniel Leidert <daniel.leidert@wgdd.de>

	* Makefile.am (MAINTAINERCLEANFILES): Added archives created by 'dist'
	target to 'maintainer-clean' target.

	* configure.ac (AC_PACKAGE_VERSION): Increased version 0.1.91. First
	RC.

	* src/chemical-mime-database.xml.in: Added almost all MIME types,
	which are used by jmol, gchempaint, pymol, rasmol, viewmol, xdrawchem
	(except the x-turbomole* MIME types used by viewmol). Fixed DTD.
	Removed comments.

	* xsl/cmd_freedesktop_org.xsl (mime-type): Added information, since
	when the MIME type is supported.

	* xsl/cmd_gnome-keys.xsl (icon): Fixed a bug. Icon name was missing.

	* xsl/cmd_kde.xsl (icon): Ditto. Further fixed the substring-after()
	usage.

	* xsl/cmd_gnome-mime.xsl (icon): Ditto.

2006-05-02 Daniel Leidert <daniel.leidert@wgdd.de>

	* freedesktop.org/Makefile.am: Fixed vpath directive to get the right
	location for chemical-mime-database.xml. Fixes 'make distcheck' error.

	* gnome/Makefile.am: Ditto.

	* kde/Makefile.am: Ditto.

	* xsl/Makefile.am (EXTRA_DIST): Added missing cmd_kde.xsl stylesheet.
	Fixes 'make distcheck' error.

2006-05-02 Daniel Leidert <daniel.leidert@wgdd.de>

	* Makefile.am (SUBDIRS): Re-added kde directory.

	* README: Adjusted info-set.

	* THANKS: Added.

	* src/chemical-mime-database.xml.in: Fixed formatting issues and
	changed element name for chemical-mime-type to mime-type as used by
	fd.o. Added chemical/x-gamess-input for testing.

	* xsl/cmd_common.xsl: Fixed header.
	(write.chunk): Removed standalone and added media-type parameter.
	(header.desktop): Added template to generate the header part of
	KDE's .desktop files.
	(header.xml): Fixed. Use xsl:comment instead of xsl:text.

	* xsl/cmd_freedesktop_org.xsl: Fixed header and several parameters.
	(chemical-mime-type, mime-type): Fixed template to fit changes in
	src/chemical-mime-database.xml.in.
	(acronym|alias|comment|expanded-acronym|glob|magic|match|root-XML)
	(sub-class-of): Small changes.

	* xsl/cmd_gnome-keys.xsl: Ditto.
	(chemical-mime-type, mime-type): Ditto.

	* xsl/cmd_gnome-mime.xsl: Ditto.
	(chemical-mime-type, mime-type): Ditto.

	* xsl/cmd_kde.xsl: Added stylesheet for KDE's .desktop files.

	* kde/*.desktop.in: Removed (replaced by new flat database).

2006-04-30 Daniel Leidert <daniel.leidert@wgdd.de>

	* configure.ac (AC_PACKAGE_VERSION): Bump version to 0.1.99 to show,
	where we want to go.

	* src/chemical-mime-database.xml.in: Fixed just a few formatting
	issues.

2006-04-30 Daniel Leidert <daniel.leidert@wgdd.de>

	* src/chemical-mime-database.xml.in: Added new flat database.

	* Makefile.am (SUBDIRS): Added new directories.

	* TODO: Moved information to the new flat database. Added a few points
	which are related to our latest change to a flat database file.

	* acinclude.m4: Added to provide a macro to get the location of
	xsltproc (and possible options to use).

	* configure.ac: Added new template to get xsltproc.
	(ALL_LINGUAS): Removed nl and fr for the moment (changes are too
	heavy, so the files need a complete update).
	(AC_CONFIG_FILES): Added new directories and Makefiles.

	* freedesktop.org/Makefile.am: Fixed to fit new flat database.

	* gnome/Makefile.am: Ditto.

	* kde/Makefile.am: Ditto.

	* freedesktop.org/chemical-mime-data.xml.in: Removed (replaced by new
	flat database).

	* gnome/chemical-mime-data.keys.in: Ditto.

	* gnome/chemical-mime-data.mime: Ditto.

	* src/Makefile.am: Added.

	* xsl/Makefile.am: Ditto.

	* xsl/cmd_common.xsl: Ditto.

	* xsl/cmd_freedesktop_org.xsl: Ditto.

	* xsl/cmd_gnome-keys.xsl: Ditto.

	* xsl/cmd_gnome-mime.xsl: Ditto.

2006-02-18 Daniel Leidert <daniel.leidert@wgdd.de>

	* configure.ac (IT_PROG_INTLTOOL): Call the AM_GNU_GETTEXT macro from
	the gettext suite instead of calling GTK's AM_GLIB_GNU_GETTEXT. Turn
	USE_NLS to 'no' to avoid installation of catalog files.

	* ABOUT-NLS: Added for AM_GNU_GETTEXT to be satisfied.

	* freedesktop.org/Makefile.am (BOOL_FREEDESKTOP_MIME_TRUE): Minor
	cleanup.

	* gnome/Makefile.am (BOOL_GNOME_MIME_TRUE): Ditto.

	* kde/Makefile.am (BOOL_KDE_MIME_TRUE): Ditto.

2006-02-17 Daniel Leidert <daniel.leidert@wgdd.de>

	* Makefile.am (MAINTAINERCLEANFILES): Added config.{sub,guess} which
	may be linked/copied by automake.

	* configure.ac (PACKAGE_BUGREPORT): Fixed project and bug-tracker URL.
	(AC_PROG_INTLTOOL, IT_PROG_INTLTOOL): AC_PROG_INTLTOOL is obsolete.
	(CATALOGS): Fixed value to avoid installation of cataloges, which are
	useless for us.

2006-02-17 Daniel Leidert <daniel.leidert@wgdd.de>

	* freedesktop.org/Makefile.am: Fixed missing file after 'make dist'
	issue caused by condition construct.

	* gnome/Makefile.am: Ditto.

	* icons/pixmaps/Makefile.am: Ditto.

	* kde/Makefile.am: Ditto.

	* icons/crystalsvg/Makefile.am: Cleaned.

	* icons/hicolor/Makefile.am: Ditto.

2006-02-17 Daniel Leidert <daniel.leidert@wgdd.de>

	* icons/crystalsvg/Makefile.am (EXTRA_DIST, ICONS, SIZES)
	(icon_sources, icon_sizes, all-local, all-icons)
	(install-data-local, uninstall-hook): Make it much more deterministic
	and simple.

	* icons/hicolor/Makefile.am (EXTRA_DIST, ICONS, SIZES)
	(icon_sources, icon_sizes, all-local, all-icons)
	(install-data-local, uninstall-hook): Ditto.

2006-02-17 Daniel Leidert <daniel.leidert@wgdd.de>

	* AUTHORS: Updated project authors information.

	* COPYING: Updated FSF address.

	* README: Ditto. Updated license and copyright information.

	* autogen.sh: Added license and file information.

	* Makefile.am: Added license and file information.
	(EXTRA_DIST): Remove automatically included files.
	(pkgconfig_DATA): Install pkgconfig file in every case.

	* chemical-mime-data.pc.in (Description, URL): Added project URL.
	Fixed description.

	* configure.ac: Added license and file information. Removed
	everything, which is put to config.h (we do not need it). Fixed option
	descriptions. Fixed result output. Fixed markup issues.
	(UPDATE_MIME_DATABASE): Added possibility for custom definition.

	* freedesktop.org/Makefile.am: Added license and file information.
	Reordered. Added information to if-endif constructs.

	* gnome/Makefile.am: Ditto.

	* icons/Makefile.am: Ditto.

	* icons/crystalsvg/Makefile.am: Ditto.

	* icons/hicolor/Makefile.am: Ditto.

	* icons/pixmaps/Makefile.am: Ditto.

	* kde/Makefile.am: Ditto.

	* freedesktop.org/chemical-mime-data.xml.in: Updated FSF address.
	(chemical/x-cerius, chemical/x-chemdraw, chemical/x-daylight-smiles)
	(chemical/x-genbank, chemical/x-mif): Commented out all MIME types
	which cause a conflict with well known MIME types.

	* gnome/chemical-mime-data.keys.in: Updated FSF address.

	* gnome/chemical-mime-data.mime: Updated FSF address.

	* po/POTFILES.in: Fixed alphabetical order.

2006-02-13 Daniel Leidert <daniel.leidert@wgdd.de>

	* po/POTFILES.in: Fixed a minor bug.

2006-02-13 Daniel Leidert <daniel.leidert@wgdd.de>

	* configure.ac (CONVERT, RSVG): Move the stuff related to rsvg and
	convert detection to a better place.

	* icons/crystalsvg/Makefile.am (all-icons): Adjust the test for RSVG
	after changing configure.ac.

	* icons/hicolor/Makefile.am (all-icons): Ditto.

2006-02-13 Daniel Leidert <daniel.leidert@wgdd.de>

	* configure.ac: Fix all AC_SUBST() macro calls.
	(RSVG, CONVERT): Add possibility for custom definition where to find
	the rsvg or convert utility (may help if they are not in PATH).

2006-02-13 Daniel Leidert <daniel.leidert@wgdd.de>

	* Move all files back to sourceforge.net. Fixed all CVS headers,
	because sf.net does not know LocalKeyword nor tag. Removed docs/ and
	examples/, because they should not be part of the source. See the
	ChangeLog for all changes in the past.

2006-01-29 Daniel Leidert <daniel.leidert@wgdd.de>

	* Makefile.am (MAINTAINERCLEANFILES): The maintainer-clean target
	should clean the source for CVS works. So everything produced with
	autogen.sh is removed with this target.

	* gnome/Makefile.am (MAINTAINERCLEANFILES): Ditto.

	* icons/Makefile.am (MAINTAINERCLEANFILES): Ditto.

	* icons/crystalsvg/Makefile.am (MAINTAINERCLEANFILES): Ditto.

	* icons/hicolor/Makefile.am (MAINTAINERCLEANFILES): Ditto.

	* icons/pixmaps/Makefile.am (MAINTAINERCLEANFILES): Ditto.

	* freedesktop.org/Makefile.am (MAINTAINERCLEANFILES): Ditto.
	(CLEANFILES): Use variable.

	* kde/Makefile.am (MAINTAINERCLEANFILES): Ditto.
	(CLEANFILES): Ditto.

	* autogen.sh: Add -c|--copy options to allow to choose between linking
	and copying the files.

2006-01-27 Daniel Leidert <daniel.leidert@wgdd.de>

	* configure.ac (PKG_CONFIG, PKG_PROG_PKG_CONFIG): Call the
	PKG_PROG_PKG_CONFIG macro to determine PKG_CONFIG.
	(PKG_CHECK_EXISTS): Determine the existance of shared-mime-info and
	gnome-mime-data-2.0 via PKG_CHECK_EXISTS macro.
	(BOOL_UPDATE_DATABASE): Fixed a bug when the fd.o shared-mime-info
	stuff should not be installed.

	* freedesktop.org/chemical-mime-data.xml.in: Began to fix the db
	stuff, whichcurrently prevents the package from working with GNOM 2.12
	and above.

	* kde/seq-aa-fasta.desktop.in: Bug (typo) fix. Reordering content.
	
	* kde/seq-aa-genpept.desktop.in: Ditto.
	
	* kde/seq-na-fasta.desktop.in: Ditto.
	
	* kde/seq-na-genbank.desktop.in: Ditto.
	
	* kde/x-alchemy.desktop.in: Ditto.
	
	* kde/x-cache-csf.desktop.in: Ditto.
	
	* kde/x-cache.desktop.in: Ditto.
	
	* kde/x-cactvs-ascii.desktop.in: Ditto.
	
	* kde/x-cactvs-binary.desktop.in: Ditto.
	
	* kde/x-cactvs-table.desktop.in: Ditto.
	
	* kde/x-cdx.desktop.in: Ditto.
	
	* kde/x-cerius.desktop.in: Ditto.
	
	* kde/x-chem3d.desktop.in: Ditto.
	
	* kde/x-chemdraw.desktop.in: Ditto.
	
	* kde/x-cif.desktop.in: Ditto.
	
	* kde/x-cmdf.desktop.in: Ditto.
	
	* kde/x-cml.desktop.in: Ditto.
	
	* kde/x-compass.desktop.in: Ditto.
	
	* kde/x-crossfire.desktop.in: Ditto.
	
	* kde/x-csml.desktop.in: Ditto.
	
	* kde/x-ctx.desktop.in: Ditto.
	
	* kde/x-cxf.desktop.in: Ditto.
	
	* kde/x-daylight-smiles.desktop.in: Ditto.
	
	* kde/x-embl-dl-nucleotide.desktop.in: Ditto.
	
	* kde/x-fasta.desktop.in: Ditto.
	
	* kde/x-galactic-spc.desktop.in: Ditto.
	
	* kde/x-gamess-input.desktop.in: Ditto.
	
	* kde/x-gaussian-checkpoint.desktop.in: Ditto.
	
	* kde/x-gaussian-cube.desktop.in: Ditto.
	
	* kde/x-gaussian-input.desktop.in: Ditto.
	
	* kde/x-gaussian-log.desktop.in: Ditto.
	
	* kde/x-gcg8-sequence.desktop.in: Ditto.
	
	* kde/x-genbank.desktop.in: Ditto.
	
	* kde/x-hin.desktop.in: Ditto.
	
	* kde/x-isostart.desktop.in: Ditto.
	
	* kde/x-jcamp-dx.desktop.in: Ditto.
	
	* kde/x-kinemage.desktop.in: Ditto.
	
	* kde/x-macmolecule.desktop.in: Ditto.
	
	* kde/x-macromodel-input.desktop.in: Ditto.
	
	* kde/x-mdl-molfile.desktop.in: Ditto.
	
	* kde/x-mdl-rdfile.desktop.in: Ditto.
	
	* kde/x-mdl-rxnfile.desktop.in: Ditto.
	
	* kde/x-mdl-sdfile.desktop.in: Ditto.
	
	* kde/x-mdl-tgf.desktop.in: Ditto.
	
	* kde/x-mif.desktop.in: Ditto.
	
	* kde/x-mmcif.desktop.in: Ditto.
	
	* kde/x-mol2.desktop.in: Ditto.
	
	* kde/x-molconn-Z.desktop.in: Ditto.
	
	* kde/x-mopac-graph.desktop.in: Ditto.
	
	* kde/x-mopac-input.desktop.in: Ditto.
	
	* kde/x-mopac-out.desktop.in: Ditto.
	
	* kde/x-mopac-vib.desktop.in: Ditto.
	
	* kde/x-ncbi-asn1-ascii.desktop.in: Ditto.
	
	* kde/x-ncbi-asn1-binary.desktop.in: Ditto.
	
	* kde/x-ncbi-asn1-spec.desktop.in: Ditto.
	
	* kde/x-pdb.desktop.in: Ditto.
	
	* kde/x-rosdal.desktop.in: Ditto.
	
	* kde/x-swissprot.desktop.in: Ditto.
	
	* kde/x-vamas-iso14976.desktop.in: Ditto.
	
	* kde/x-vmd.desktop.in: Ditto.
	
	* kde/x-xtel.desktop.in: Ditto.
	
	* kde/x-xyz.desktop.in: Ditto.

	* kde/x-cactvs-table.desktop.in: The only without the bug :(. Only
	reordering content here.

2006-01-13 Daniel Leidert <daniel.leidert@wgdd.de>

	* TODO: Add some important notes.

	* docs/README: Add a few resources and restructure.

2006-01-02 Daniel Leidert <daniel.leidert@wgdd.de>

	* ChangeLog: Changed used CVS keyword to a local one. More useful
	summary.

	* AUTHORS: Ditto.

	* NEWS: Ditto.

	* TODO: Ditto.

	* autogen.sh: Ditto.

	* docs/APPLIST: Ditto.

	* docs/README: Ditto.

	* examples/README: Ditto.

	* README: Ditto. Fixed copyright info.

	* freedesktop.org/chemical-mime-data.xml.in: Ditto.

	* gnome/chemical-mime-data.keys.in: Ditto.

	* gnome/chemical-mime-data.mime: Ditto.

2005-11-15 Daniel Leidert <daniel.leidert@wgdd.de>

	* autogen.sh (autotools): Remove autoheader.

	* configure.ac (dnl initialisation): Remove useless (auto)header
	stuff.

	* ChangeLog: Fixed syntax.

2005-10-05 Daniel Leidert <daniel.leidert@wgdd.de>

	* freedesktop.org/Makefile.am: Run update-mime-database at the right
	place $(DIR-FDMIME).

2005-09-19 Daniel Leidert <daniel.leidert@wgdd.de>

	* configure.ac: Added French to ALL_LINGUAS (thanks to Jean Bréfort).

2005-09-19 Daniel Leidert <daniel.leidert@wgdd.de>

	* autogen.sh: Manually link to automake scripts, if running automake
	does not copy/link the scripts.

	* configure.ac: Fixed a bug found by Jean, which leads to a
	unsatisfiable Requires: entry in chemical-mime-data.pc.

2005-08-22 Daniel Leidert <daniel.leidert@wgdd.de>

	* configure.ac, Makefile.am: Do not run update-mime-database for
	distcheck target but run it as default during normal installation.

	* configure.ac: Added option to choose the application to convert the
	verctor graphics and fix the decision-condition.
	
	* icons/crystalsvg/Makefile.am: Ditto.
	
	* icons/hicolor/Makefile.am: Ditto.

2005-06-30 Daniel Leidert <daniel.leidert@wgdd.de>

	* examples/README: Added some infos.

2005-06-30 Daniel Leidert <daniel.leidert@wgdd.de>

	* AUTHORS: Removed obsolete "DocumentId" string.
	
	* ChangeLog: Ditto.
	
	* NEWS: Ditto.
	
	* README: Ditto.
	
	* TODO: Ditto.
	
	* autogen.sh: Ditto.
	
	* docs/APPLIST: Ditto.

	* docs/README: Ditto.
	
	* freedesktop.org/chemical-mime-data.xml.in: Ditto.

	* gnome/chemical-mime-data.keys.in: Ditto.
	
	* gnome/chemical-mime-data.mime: Ditto.

	* ChangeLog: Fixed syntax.

2005-06-15 Daniel Leidert <daniel.leidert@wgdd.de>

	* Makefile.am: Fixed EXTRA_DIST.

2005-06-14 Daniel Leidert <daniel.leidert@wgdd.de>

	* COPYING: Moved whole package to GNU LGPL v.2.1.
	
	* NEWS: Ditto.
	
	* README: Ditto.
	
	* debian/copyright: Ditto.

	* freedesktop.org/chemical-mime-data.xml.in: Ditto.

	* gnome/chemical-mime-data.keys.in: Ditto.
	
	* gnome/chemical-mime-data.mime: Ditto.

	* LICENSE: Removed. COPYING is enough.
	
2005-06-14 Daniel Leidert <daniel.leidert@wgdd.de>

	* INSTALL: Readded readded with generic instructions.
	
	* AUTHORS: Added some infos. Fixed format issues.
	
	* COPYING: Ditto.
	
	* NEWS: Ditto.
	
	* README: Ditto.
	
	* TODO: Ditto.

2005-06-14 Daniel Leidert <daniel.leidert@wgdd.de>

	* Makefile.am: Added AUTOMAKE_OPTIONS.
	
	* configure.ac: Remove AUTOMAKE_OPTIONS (dist-bzip2).
	
	* INSTALL: Removed temporarily.

2005-05-09 Daniel Leidert <daniel.leidert@wgdd.de>

	* TODO: Fix typo. Added naming scheme note to release list.

2005-05-09 Daniel Leidert <daniel.leidert@wgdd.de>

	* Makefile.am: Commented out disableuninstallcheck. Reordered some
	parts.

2005-05-09 Daniel Leidert <daniel.leidert@wgdd.de>

	* INSTALL: Fixed typo.
	
	* NEWS: Added some more notes about done stuff.
	
	* chemical-mime-data.pc.in: Fixed description.

2005-05-09 Daniel Leidert <daniel.leidert@wgdd.de>

	* COPYING: Updated copyright information.

2005-05-09 Daniel Leidert <daniel.leidert@wgdd.de>

	* gnome/chemical-mime-data.keys.in: Fix a format bug.

2005-05-09 Daniel Leidert <daniel.leidert@wgdd.de>

	* configure.ac: Merged informational output.

2005-05-07 Daniel Leidert <daniel.leidert@wgdd.de>

	* kde/Makefile.am: Fix a bug (obsolete file mentioned).
	
	* freedesktop.org/chemical-mime-data.xml.in: Added a bit more info to
	the header.

	* gnome/chemical-mime-data.keys.in: Ditto.
	
	* gnome/chemical-mime-data.mime: Ditto.

2005-05-06 Daniel Leidert <daniel.leidert@wgdd.de>

	* freedesktop.org/chemical-mime-data.xml.in: Added license information to
	top of the file. Changed order of type and value. Set back a lot of
	comments for now.
	
	* gnome/chemical-mime-data.keys.in: Added missing types. Changed some
	descriptions. Added license information to top of the file.
	
	* gnome/chemical-mime-data.mime: Added missing MIME types. Commented out
	conflicting ones. Added license information to top of the file.
	
	* kde/Makefile.am: Added missing files. Fixed a build issue.
	
	* kde/seq-aa-genpept.desktop.in: Fixed comment and added missing
	pattern.
	
	* kde/seq-na-genbank.desktop.in: Ditto.

	* kde/x-mdl-rdfile.desktop: Ditto.
	
	* kde/x-mif.desktop.in: Ditto.
	
	* kde/x-pdb.desktop.in: Ditto.

	* kde/x-rosdal.desktop.in: Ditto.
	
	* kde/x-vamas-iso14976.desktop.in: Ditto.
	
	* kde/seq-aa-fasta.desktop.in: Ditto.
	
	* kde/seq-na-fasta.desktop.in: Ditto.
	
	* kde/x-fasta.desktop.in: Ditto.
	
	* kde/x-ncbi-asn1-ascii.desktop.in: Ditto.

	* kde/x-ncbi-asn1-spec.desktop.in: Ditto.
	
	* kde/x-ncbi-asn1.desktop.in: Removed.
	
	* kde/x-ppd.desktop.in: Removed.

2005-05-05 Daniel Leidert <daniel.leidert@wgdd.de>
	
	* AUTHORS: Updated information.
	
	* INSTALL: Ditto.
	
	* README: Ditto.
	
	* NEWS: Ditto.
	
	* TODO: Ditto.
	
	* autogen.sh: Remove --force option to prevent overwriting INSTALL.
	
	* debian/changelog: Changed from native to non-native package
	revision.
	
	* debian/control: Updated depends (removed all autoconf/automake
	depends).
	
	* debian/rules: Remove all lines running autoconf/automake parts.

2005-05-05 Daniel Leidert <daniel.leidert@wgdd.de>
	
	* configure.ac: Added more checks and try to solve possible
	"impossible" situations. Added a bit more output, what will be done
	and changed some general output.

2005-05-05 Daniel Leidert <daniel.leidert@wgdd.de>
	
	* configure.ac: Worked on a better structure. Readded possibility to
	change path directions, but use $datadir as default. Added a bit more
	useful output. Added checks for shared-mime-info and gnome-mime-data.
	
	* freedesktop.org/Makefile.am: Fixed installation path determination
	(determined during configure, see above).
	
	* gnome/Makefile.am: Ditto.

	* icons/crystalsvg/Makefile.am: Ditto.
	
	* icons/hicolor/Makefile.am: Ditto.

	* icons/pixmaps/Makefile.am: Ditto.
	
	* kde/Makefile.am: Ditto.
	
	* TODO: Refined todo list and removed done parts.

2005-05-03 Daniel Leidert <daniel.leidert@wgdd.de>
	
	* configure.ac: Remove leading space in $CHEMICAL_MIME_DEPS. Added a
	bit more info if pkgconfig cannot detect packages.
	
	* chemical-mime-data.pc.in: Fixed description. Added empty 'Libs:' and
	'Cflags' fields.
	
	* TODO: Some clean up.
	
	* examples/README: Added basic structure for additional testing. Added
	additional infos.
	
	* docs/mime-data-specification.txt: Added additional infos.
	
	* docs/mime-descriptions-guidelines: Ditto.

	* docs/README: Ditto.
	
	* docs/APPLIST: Ditto.

2005-05-02 Daniel Leidert <daniel.leidert@wgdd.de>

	* TODO: Added note about conflicting types.
	
	* freedesktop.org/chemical-mime-data.xml.in: Ditto.
	
	* Makefile.am: Fixed clean/distclean target. Added workaround for
	distcheck target.
	
	* chemical-mime-data.pc.in: Added dependencies. Added correct
	information during parse process.
	
	* configure.ac: Fixed a possible error situation
	(update-mime-database). Added a bit more useful output. Added
	dependency collection and dist-bzip2 target. Option update-database is
	turned off by default.
	
	* icons/hicolor/Makefile.am: More work on flexibility.
	
	* icons/crystalsvg/Makefile.am: Ditto.
	
	* debian/control: Fixed Depends/Suggests/Replaces.
	
	* debian/rules: Add a fix for an autoconf-bug, several targets and
	.PHONY (the real solution for 2005-03-03 change).

2005-05-01 Daniel Leidert <daniel.leidert@wgdd.de>

	* Too much changes to point out every file change: Complete rework of
	theme-icon installation. Removed all raster images (they are now
	created from vector format). Removed the whole check for paths (need
	to be reintroduced later again, but in a better way then the old one).
	Renamed package and files to chemical-mime-data (IMHO a better name).
	Fixed almost all distcheck issues except the one caused by the run of
	update-mime-database which seems unsolvable (workaround: set
	ENABLE_UPDATEDB default to 'no'). Removed all obsolete files, fixed
	the rest.

2005-03-21 Daniel Leidert <daniel.leidert@wgdd.de>

	* freedesktop.org/chemicalMIME.xml.in: Fixed missing end tag.
	
	* kde/Makefile.am: Added a missing MIME type (still not complete).
	
	* TODO: Reordered list.

2005-03-20 Daniel Leidert <daniel.leidert@wgdd.de>

	* chemicalMIME.xml.in: Added a few MIME types, missing patterns,
	sub-class-of and alias attributes and more detection stuff
	(chemical/x-pdb, chemical/x-hin, chemical/x-cml).

	* docs/shared-mime-info-spec.pdf.gz: added spec information.

2005-03-18 Egon Willighagen <e.willighagen@science.ru.nl>

	* Added MIMEs metioned in Taverna.sf.net User Guide.

2005-03-15 Daniel Leidert <daniel.leidert@wgdd.de>

	* icons/*: A lot of rework to cover chemical MIME types with icons.
	
	* kde/x-cactvs-ascii.desktop.in: Added both by dividing
	kde/x-cactvs-binary.desktop.in.
	
	* kde/x-cactvs-table.desktop.in: Ditto.
	
	* kde/x-ncbi-asn1-spec.desktop.in: Removed (seem to be obsolete).
	
	* kde/x-ncbi-asn1-ascii.desktop.in: Removed (seem to be obsolete).
	
	* kde/x-ncbi-asn1.desktop.in: Changed description a bit.
	
	* kde/x-ncbi-asn1-binary.desktop.in: Ditto.
	
	* kde/*.desktop.in: Fixed (see above).
	
	* gnome/chemicalmime.mime: Ditto.
	
	* gnome/chemicalmime.keys: Ditto.

	* freedesktop.org/chemicalMIME.xml.in: Ditto. Commented out *.dat
	extension for chemical/x-mopac-input.
	
	* configure.ac: Cosmetic fix (change option order and PATH-tests).
	
	* TODO: Added comment about ROX MIME handling.

2005-03-15 Daniel Leidert <daniel.leidert@wgdd.de>

	* INSTALL: GNOME icon installation can be done easier by installing
	icons into hicolor theme (for GNOME > 2.4). Pixmaps icons are now
	represented by one icon (should be extended later - this is for now).
	Some variables changed because auf changes in configure.ac. Renamed
	options to fit their real need.
	
	* README: Ditto.
	
	* TODO: Ditto.
	
	* configure.ac: Ditto.
	
	* icons/hicolor/*: Ditto.

	* icons/crystalsvg/*: Ditto.
	
	* icons/pixmaps: Ditto.

2005-03-11 Daniel Leidert <daniel.leidert@wgdd.de>
	
	* README: Begin rewriting (adding info about configure options, basic
	knowledge about MIME handling).
	
	* TODO: Added note about chemical/x-cdx.
	
	* configure.ac: Added options to handle theme icon install. Clean
	up and fix a bug related to intltool.
	
	* Makefile.am: Do not clean up all autotools stuff. Removed VERSION
	from EXTRA_DIST. Added po to SUBDIRS.
	
	* icons/Makefile.am: Readded pixmaps subdir.
	
	* icons/pixmaps: Ditto.
	
	* icons/gnome: Added gnome (theme) subdir.
	
	* icons/*/Makefile.am: Fixed renamed theme install path.
	
	* gnome/icons: Moved back to icons/pixmaps.
	
	* gnome/Makefile.am: Fixed renamed booleans, removed pixmaps subdir.
	
	* kde/Makefile.am: Fixed renamed booleans, EXTRA_DIST, CLEANFILES (fix
	'make dist' target), non-available x-cdx.desktop(.in).
	
	* debian/chemicalmime.dirs: Removed (obsolete).

2005-03-10 Daniel Leidert <daniel.leidert@wgdd.de>

	* chemicalmime.pc.in: Added pk-config stuff.
	
	* Makefile.am: Ditto.
	
	* configure.ac: Ditto and some clean-up. 

	* debian/rules: Clean-up autotools run.
	
	* debian/control: Added pkg-config stuff. Fix build dependencies (see
	above).

2005-03-04 Daniel Leidert <daniel.leidert@wgdd.de>

	* GNOME 2.4 support rewritten with icons support (still to change,
	because theme-icons can be also installed).

2005-03-03 Daniel Leidert <daniel.leidert@wgdd.de>

	* **/Makefile.am: Fixed several bugs and issues.
	  
	* debian/rules: Fixed targets (it should not process the build-target
	several times).
	
	* freedesktop.org/Makefile.am: Now considers
	--without-freedesktop_org-mime.

2005-03-02 Daniel Leidert <daniel.leidert@wgdd.de>

	* Clean up directory by removing unnecessary files.
	
	* Adding options to configure-script to choose, which support should
	be installed.
	
	* Fixing all related Makefiles.
	
	* Moving special stuff in subdiretories to get a better overview for
	every package part (pixmaps, kde mimelnk files, gnome2.4 mime-info
	and freedesktop.org shared mime info).
	
	* Fix building of the Debian package.

# UTF-8