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<a href="Bio-module.html">Package Bio</a> ::
<a href="Bio.Blast-module.html">Package Blast</a> ::
<a href="Bio.Blast.NCBIStandalone-module.html">Module NCBIStandalone</a> ::
Class _PSIBlastConsumer
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<!-- ==================== CLASS DESCRIPTION ==================== -->
<h1 class="epydoc">Class _PSIBlastConsumer</h1><p class="nomargin-top"><span class="codelink"><a href="Bio.Blast.NCBIStandalone-pysrc.html#_PSIBlastConsumer">source code</a></span></p>
<pre class="base-tree">
object --+
|
<a href="Bio.ParserSupport.AbstractConsumer-class.html">ParserSupport.AbstractConsumer</a> --+
|
<a href="Bio.Blast.NCBIStandalone._HeaderConsumer-class.html" onclick="show_private();">_HeaderConsumer</a> --+
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<a href="Bio.Blast.NCBIStandalone._DescriptionConsumer-class.html" onclick="show_private();">_DescriptionConsumer</a> --+
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<a href="Bio.Blast.NCBIStandalone._AlignmentConsumer-class.html" onclick="show_private();">_AlignmentConsumer</a> --+
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<a href="Bio.Blast.NCBIStandalone._HSPConsumer-class.html" onclick="show_private();">_HSPConsumer</a> --+
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<a href="Bio.Blast.NCBIStandalone._DatabaseReportConsumer-class.html" onclick="show_private();">_DatabaseReportConsumer</a> --+
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<a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html" onclick="show_private();">_ParametersConsumer</a> --+
|
<strong class="uidshort">_PSIBlastConsumer</strong>
</pre>
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<!-- ==================== INSTANCE METHODS ==================== -->
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<td><span class="summary-sig"><a href="Bio.Blast.NCBIStandalone._PSIBlastConsumer-class.html#__init__" class="summary-sig-name">__init__</a>(<span class="summary-sig-arg">self</span>)</span><br />
x.__init__(...) initializes x; see help(type(x)) for signature</td>
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<span class="codelink"><a href="Bio.Blast.NCBIStandalone-pysrc.html#_PSIBlastConsumer.__init__">source code</a></span>
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<td><span class="summary-sig"><a href="Bio.Blast.NCBIStandalone._PSIBlastConsumer-class.html#start_header" class="summary-sig-name">start_header</a>(<span class="summary-sig-arg">self</span>)</span></td>
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<span class="codelink"><a href="Bio.Blast.NCBIStandalone-pysrc.html#_PSIBlastConsumer.start_header">source code</a></span>
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<span class="summary-type"> </span>
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<td><span class="summary-sig"><a href="Bio.Blast.NCBIStandalone._PSIBlastConsumer-class.html#end_header" class="summary-sig-name">end_header</a>(<span class="summary-sig-arg">self</span>)</span></td>
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<span class="codelink"><a href="Bio.Blast.NCBIStandalone-pysrc.html#_PSIBlastConsumer.end_header">source code</a></span>
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<span class="summary-type"> </span>
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<td><span class="summary-sig"><a href="Bio.Blast.NCBIStandalone._PSIBlastConsumer-class.html#start_descriptions" class="summary-sig-name">start_descriptions</a>(<span class="summary-sig-arg">self</span>)</span></td>
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<span class="codelink"><a href="Bio.Blast.NCBIStandalone-pysrc.html#_PSIBlastConsumer.start_descriptions">source code</a></span>
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<td><span class="summary-sig"><a href="Bio.Blast.NCBIStandalone._PSIBlastConsumer-class.html#end_descriptions" class="summary-sig-name">end_descriptions</a>(<span class="summary-sig-arg">self</span>)</span></td>
<td align="right" valign="top">
<span class="codelink"><a href="Bio.Blast.NCBIStandalone-pysrc.html#_PSIBlastConsumer.end_descriptions">source code</a></span>
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<span class="summary-type"> </span>
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<tr>
<td><span class="summary-sig"><a href="Bio.Blast.NCBIStandalone._PSIBlastConsumer-class.html#end_alignment" class="summary-sig-name">end_alignment</a>(<span class="summary-sig-arg">self</span>)</span></td>
<td align="right" valign="top">
<span class="codelink"><a href="Bio.Blast.NCBIStandalone-pysrc.html#_PSIBlastConsumer.end_alignment">source code</a></span>
</td>
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<td width="15%" align="right" valign="top" class="summary">
<span class="summary-type"> </span>
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<tr>
<td><span class="summary-sig"><a href="Bio.Blast.NCBIStandalone._PSIBlastConsumer-class.html#end_hsp" class="summary-sig-name">end_hsp</a>(<span class="summary-sig-arg">self</span>)</span></td>
<td align="right" valign="top">
<span class="codelink"><a href="Bio.Blast.NCBIStandalone-pysrc.html#_PSIBlastConsumer.end_hsp">source code</a></span>
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<span class="summary-type"> </span>
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<tr>
<td><span class="summary-sig"><a href="Bio.Blast.NCBIStandalone._PSIBlastConsumer-class.html#end_database_report" class="summary-sig-name">end_database_report</a>(<span class="summary-sig-arg">self</span>)</span></td>
<td align="right" valign="top">
<span class="codelink"><a href="Bio.Blast.NCBIStandalone-pysrc.html#_PSIBlastConsumer.end_database_report">source code</a></span>
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<td width="15%" align="right" valign="top" class="summary">
<span class="summary-type"> </span>
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<td><span class="summary-sig"><a href="Bio.Blast.NCBIStandalone._PSIBlastConsumer-class.html#end_parameters" class="summary-sig-name">end_parameters</a>(<span class="summary-sig-arg">self</span>)</span></td>
<td align="right" valign="top">
<span class="codelink"><a href="Bio.Blast.NCBIStandalone-pysrc.html#_PSIBlastConsumer.end_parameters">source code</a></span>
</td>
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<tr>
<td colspan="2" class="summary">
<p class="indent-wrapped-lines"><b>Inherited from <code><a href="Bio.ParserSupport.AbstractConsumer-class.html">ParserSupport.AbstractConsumer</a></code></b>:
<code><a href="Bio.ParserSupport.AbstractConsumer-class.html#__getattr__">__getattr__</a></code>
</p>
<div class="private"> <p class="indent-wrapped-lines"><b>Inherited from <code><a href="Bio.ParserSupport.AbstractConsumer-class.html">ParserSupport.AbstractConsumer</a></code></b> (private):
<code><a href="Bio.ParserSupport.AbstractConsumer-class.html#_unhandled" onclick="show_private();">_unhandled</a></code>,
<code><a href="Bio.ParserSupport.AbstractConsumer-class.html#_unhandled_section" onclick="show_private();">_unhandled_section</a></code>
</p></div>
<p class="indent-wrapped-lines"><b>Inherited from <code>object</code></b>:
<code>__delattr__</code>,
<code>__format__</code>,
<code>__getattribute__</code>,
<code>__hash__</code>,
<code>__new__</code>,
<code>__reduce__</code>,
<code>__reduce_ex__</code>,
<code>__repr__</code>,
<code>__setattr__</code>,
<code>__sizeof__</code>,
<code>__str__</code>,
<code>__subclasshook__</code>
</p>
<p class="indent-wrapped-lines"><b>Inherited from <code><a href="Bio.Blast.NCBIStandalone._HeaderConsumer-class.html" onclick="show_private();">_HeaderConsumer</a></code></b>:
<code><a href="Bio.Blast.NCBIStandalone._HeaderConsumer-class.html#database_info">database_info</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._HeaderConsumer-class.html#query_info">query_info</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._HeaderConsumer-class.html#reference">reference</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._HeaderConsumer-class.html#version">version</a></code>
</p>
<p class="indent-wrapped-lines"><b>Inherited from <code><a href="Bio.Blast.NCBIStandalone._DescriptionConsumer-class.html" onclick="show_private();">_DescriptionConsumer</a></code></b>:
<code><a href="Bio.Blast.NCBIStandalone._DescriptionConsumer-class.html#converged">converged</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._DescriptionConsumer-class.html#description">description</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._DescriptionConsumer-class.html#description_header">description_header</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._DescriptionConsumer-class.html#model_sequences">model_sequences</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._DescriptionConsumer-class.html#no_hits">no_hits</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._DescriptionConsumer-class.html#nonmodel_sequences">nonmodel_sequences</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._DescriptionConsumer-class.html#round">round</a></code>
</p>
<div class="private"> <p class="indent-wrapped-lines"><b>Inherited from <code><a href="Bio.Blast.NCBIStandalone._DescriptionConsumer-class.html" onclick="show_private();">_DescriptionConsumer</a></code></b> (private):
<code><a href="Bio.Blast.NCBIStandalone._DescriptionConsumer-class.html#_parse" onclick="show_private();">_parse</a></code>
</p></div>
<p class="indent-wrapped-lines"><b>Inherited from <code><a href="Bio.Blast.NCBIStandalone._AlignmentConsumer-class.html" onclick="show_private();">_AlignmentConsumer</a></code></b>:
<code><a href="Bio.Blast.NCBIStandalone._AlignmentConsumer-class.html#length">length</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._AlignmentConsumer-class.html#multalign">multalign</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._AlignmentConsumer-class.html#start_alignment">start_alignment</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._AlignmentConsumer-class.html#title">title</a></code>
</p>
<p class="indent-wrapped-lines"><b>Inherited from <code><a href="Bio.Blast.NCBIStandalone._HSPConsumer-class.html" onclick="show_private();">_HSPConsumer</a></code></b>:
<code><a href="Bio.Blast.NCBIStandalone._HSPConsumer-class.html#align">align</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._HSPConsumer-class.html#frame">frame</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._HSPConsumer-class.html#identities">identities</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._HSPConsumer-class.html#query">query</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._HSPConsumer-class.html#sbjct">sbjct</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._HSPConsumer-class.html#score">score</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._HSPConsumer-class.html#start_hsp">start_hsp</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._HSPConsumer-class.html#strand">strand</a></code>
</p>
<p class="indent-wrapped-lines"><b>Inherited from <code><a href="Bio.Blast.NCBIStandalone._DatabaseReportConsumer-class.html" onclick="show_private();">_DatabaseReportConsumer</a></code></b>:
<code><a href="Bio.Blast.NCBIStandalone._DatabaseReportConsumer-class.html#database">database</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._DatabaseReportConsumer-class.html#gapped">gapped</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._DatabaseReportConsumer-class.html#ka_params">ka_params</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._DatabaseReportConsumer-class.html#ka_params_gap">ka_params_gap</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._DatabaseReportConsumer-class.html#num_letters_in_database">num_letters_in_database</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._DatabaseReportConsumer-class.html#num_sequences_in_database">num_sequences_in_database</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._DatabaseReportConsumer-class.html#posted_date">posted_date</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._DatabaseReportConsumer-class.html#start_database_report">start_database_report</a></code>
</p>
<p class="indent-wrapped-lines"><b>Inherited from <code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html" onclick="show_private();">_ParametersConsumer</a></code></b>:
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#blast_cutoff">blast_cutoff</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#database_length">database_length</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#dropoff_1st_pass">dropoff_1st_pass</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#effective_database_length">effective_database_length</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#effective_hsp_length">effective_hsp_length</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#effective_query_length">effective_query_length</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#effective_search_space">effective_search_space</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#effective_search_space_used">effective_search_space_used</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#frameshift">frameshift</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#gap_penalties">gap_penalties</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#gap_trigger">gap_trigger</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#gap_x_dropoff">gap_x_dropoff</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#gap_x_dropoff_final">gap_x_dropoff_final</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#hsps_gapped">hsps_gapped</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#hsps_no_gap">hsps_no_gap</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#hsps_prelim_gapped">hsps_prelim_gapped</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#hsps_prelim_gapped_attempted">hsps_prelim_gapped_attempted</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#matrix">matrix</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#num_extends">num_extends</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#num_good_extends">num_good_extends</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#num_hits">num_hits</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#num_seqs_better_e">num_seqs_better_e</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#num_sequences">num_sequences</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#query_length">query_length</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#start_parameters">start_parameters</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#threshold">threshold</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#window_size">window_size</a></code>
</p>
</td>
</tr>
</table>
<!-- ==================== CLASS VARIABLES ==================== -->
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cellspacing="0" width="100%" bgcolor="white">
<tr bgcolor="#70b0f0" class="table-header">
<td colspan="2" class="table-header">
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<tr valign="top">
<td align="left"><span class="table-header">Class Variables</span></td>
<td align="right" valign="top"
><span class="options">[<a href="#section-ClassVariables"
class="privatelink" onclick="toggle_private();"
>hide private</a>]</span></td>
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<td colspan="2" class="summary">
<div class="private"> <p class="indent-wrapped-lines"><b>Inherited from <code><a href="Bio.Blast.NCBIStandalone._HSPConsumer-class.html" onclick="show_private();">_HSPConsumer</a></code></b> (private):
<code><a href="Bio.Blast.NCBIStandalone._HSPConsumer-class.html#_query_re" onclick="show_private();">_query_re</a></code>,
<code><a href="Bio.Blast.NCBIStandalone._HSPConsumer-class.html#_sbjct_re" onclick="show_private();">_sbjct_re</a></code>
</p></div>
</td>
</tr>
</table>
<!-- ==================== PROPERTIES ==================== -->
<a name="section-Properties"></a>
<table class="summary" border="1" cellpadding="3"
cellspacing="0" width="100%" bgcolor="white">
<tr bgcolor="#70b0f0" class="table-header">
<td colspan="2" class="table-header">
<table border="0" cellpadding="0" cellspacing="0" width="100%">
<tr valign="top">
<td align="left"><span class="table-header">Properties</span></td>
<td align="right" valign="top"
><span class="options">[<a href="#section-Properties"
class="privatelink" onclick="toggle_private();"
>hide private</a>]</span></td>
</tr>
</table>
</td>
</tr>
<tr>
<td colspan="2" class="summary">
<p class="indent-wrapped-lines"><b>Inherited from <code>object</code></b>:
<code>__class__</code>
</p>
</td>
</tr>
</table>
<!-- ==================== METHOD DETAILS ==================== -->
<a name="section-MethodDetails"></a>
<table class="details" border="1" cellpadding="3"
cellspacing="0" width="100%" bgcolor="white">
<tr bgcolor="#70b0f0" class="table-header">
<td colspan="2" class="table-header">
<table border="0" cellpadding="0" cellspacing="0" width="100%">
<tr valign="top">
<td align="left"><span class="table-header">Method Details</span></td>
<td align="right" valign="top"
><span class="options">[<a href="#section-MethodDetails"
class="privatelink" onclick="toggle_private();"
>hide private</a>]</span></td>
</tr>
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</td>
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<a name="__init__"></a>
<div>
<table class="details" border="1" cellpadding="3"
cellspacing="0" width="100%" bgcolor="white">
<tr><td>
<table width="100%" cellpadding="0" cellspacing="0" border="0">
<tr valign="top"><td>
<h3 class="epydoc"><span class="sig"><span class="sig-name">__init__</span>(<span class="sig-arg">self</span>)</span>
<br /><em class="fname">(Constructor)</em>
</h3>
</td><td align="right" valign="top"
><span class="codelink"><a href="Bio.Blast.NCBIStandalone-pysrc.html#_PSIBlastConsumer.__init__">source code</a></span>
</td>
</tr></table>
<p>x.__init__(...) initializes x; see help(type(x)) for signature</p>
<dl class="fields">
<dt>Overrides:
object.__init__
<dd><em class="note">(inherited documentation)</em></dd>
</dt>
</dl>
</td></tr></table>
</div>
<a name="start_header"></a>
<div>
<table class="details" border="1" cellpadding="3"
cellspacing="0" width="100%" bgcolor="white">
<tr><td>
<table width="100%" cellpadding="0" cellspacing="0" border="0">
<tr valign="top"><td>
<h3 class="epydoc"><span class="sig"><span class="sig-name">start_header</span>(<span class="sig-arg">self</span>)</span>
</h3>
</td><td align="right" valign="top"
><span class="codelink"><a href="Bio.Blast.NCBIStandalone-pysrc.html#_PSIBlastConsumer.start_header">source code</a></span>
</td>
</tr></table>
<dl class="fields">
<dt>Overrides:
<a href="Bio.Blast.NCBIStandalone._HeaderConsumer-class.html#start_header">_HeaderConsumer.start_header</a>
</dt>
</dl>
</td></tr></table>
</div>
<a name="end_header"></a>
<div>
<table class="details" border="1" cellpadding="3"
cellspacing="0" width="100%" bgcolor="white">
<tr><td>
<table width="100%" cellpadding="0" cellspacing="0" border="0">
<tr valign="top"><td>
<h3 class="epydoc"><span class="sig"><span class="sig-name">end_header</span>(<span class="sig-arg">self</span>)</span>
</h3>
</td><td align="right" valign="top"
><span class="codelink"><a href="Bio.Blast.NCBIStandalone-pysrc.html#_PSIBlastConsumer.end_header">source code</a></span>
</td>
</tr></table>
<dl class="fields">
<dt>Overrides:
<a href="Bio.Blast.NCBIStandalone._HeaderConsumer-class.html#end_header">_HeaderConsumer.end_header</a>
</dt>
</dl>
</td></tr></table>
</div>
<a name="start_descriptions"></a>
<div>
<table class="details" border="1" cellpadding="3"
cellspacing="0" width="100%" bgcolor="white">
<tr><td>
<table width="100%" cellpadding="0" cellspacing="0" border="0">
<tr valign="top"><td>
<h3 class="epydoc"><span class="sig"><span class="sig-name">start_descriptions</span>(<span class="sig-arg">self</span>)</span>
</h3>
</td><td align="right" valign="top"
><span class="codelink"><a href="Bio.Blast.NCBIStandalone-pysrc.html#_PSIBlastConsumer.start_descriptions">source code</a></span>
</td>
</tr></table>
<dl class="fields">
<dt>Overrides:
<a href="Bio.Blast.NCBIStandalone._DescriptionConsumer-class.html#start_descriptions">_DescriptionConsumer.start_descriptions</a>
</dt>
</dl>
</td></tr></table>
</div>
<a name="end_descriptions"></a>
<div>
<table class="details" border="1" cellpadding="3"
cellspacing="0" width="100%" bgcolor="white">
<tr><td>
<table width="100%" cellpadding="0" cellspacing="0" border="0">
<tr valign="top"><td>
<h3 class="epydoc"><span class="sig"><span class="sig-name">end_descriptions</span>(<span class="sig-arg">self</span>)</span>
</h3>
</td><td align="right" valign="top"
><span class="codelink"><a href="Bio.Blast.NCBIStandalone-pysrc.html#_PSIBlastConsumer.end_descriptions">source code</a></span>
</td>
</tr></table>
<dl class="fields">
<dt>Overrides:
<a href="Bio.Blast.NCBIStandalone._DescriptionConsumer-class.html#end_descriptions">_DescriptionConsumer.end_descriptions</a>
</dt>
</dl>
</td></tr></table>
</div>
<a name="end_alignment"></a>
<div>
<table class="details" border="1" cellpadding="3"
cellspacing="0" width="100%" bgcolor="white">
<tr><td>
<table width="100%" cellpadding="0" cellspacing="0" border="0">
<tr valign="top"><td>
<h3 class="epydoc"><span class="sig"><span class="sig-name">end_alignment</span>(<span class="sig-arg">self</span>)</span>
</h3>
</td><td align="right" valign="top"
><span class="codelink"><a href="Bio.Blast.NCBIStandalone-pysrc.html#_PSIBlastConsumer.end_alignment">source code</a></span>
</td>
</tr></table>
<dl class="fields">
<dt>Overrides:
<a href="Bio.Blast.NCBIStandalone._AlignmentConsumer-class.html#end_alignment">_AlignmentConsumer.end_alignment</a>
</dt>
</dl>
</td></tr></table>
</div>
<a name="end_hsp"></a>
<div>
<table class="details" border="1" cellpadding="3"
cellspacing="0" width="100%" bgcolor="white">
<tr><td>
<table width="100%" cellpadding="0" cellspacing="0" border="0">
<tr valign="top"><td>
<h3 class="epydoc"><span class="sig"><span class="sig-name">end_hsp</span>(<span class="sig-arg">self</span>)</span>
</h3>
</td><td align="right" valign="top"
><span class="codelink"><a href="Bio.Blast.NCBIStandalone-pysrc.html#_PSIBlastConsumer.end_hsp">source code</a></span>
</td>
</tr></table>
<dl class="fields">
<dt>Overrides:
<a href="Bio.Blast.NCBIStandalone._HSPConsumer-class.html#end_hsp">_HSPConsumer.end_hsp</a>
</dt>
</dl>
</td></tr></table>
</div>
<a name="end_database_report"></a>
<div>
<table class="details" border="1" cellpadding="3"
cellspacing="0" width="100%" bgcolor="white">
<tr><td>
<table width="100%" cellpadding="0" cellspacing="0" border="0">
<tr valign="top"><td>
<h3 class="epydoc"><span class="sig"><span class="sig-name">end_database_report</span>(<span class="sig-arg">self</span>)</span>
</h3>
</td><td align="right" valign="top"
><span class="codelink"><a href="Bio.Blast.NCBIStandalone-pysrc.html#_PSIBlastConsumer.end_database_report">source code</a></span>
</td>
</tr></table>
<dl class="fields">
<dt>Overrides:
<a href="Bio.Blast.NCBIStandalone._DatabaseReportConsumer-class.html#end_database_report">_DatabaseReportConsumer.end_database_report</a>
</dt>
</dl>
</td></tr></table>
</div>
<a name="end_parameters"></a>
<div>
<table class="details" border="1" cellpadding="3"
cellspacing="0" width="100%" bgcolor="white">
<tr><td>
<table width="100%" cellpadding="0" cellspacing="0" border="0">
<tr valign="top"><td>
<h3 class="epydoc"><span class="sig"><span class="sig-name">end_parameters</span>(<span class="sig-arg">self</span>)</span>
</h3>
</td><td align="right" valign="top"
><span class="codelink"><a href="Bio.Blast.NCBIStandalone-pysrc.html#_PSIBlastConsumer.end_parameters">source code</a></span>
</td>
</tr></table>
<dl class="fields">
<dt>Overrides:
<a href="Bio.Blast.NCBIStandalone._ParametersConsumer-class.html#end_parameters">_ParametersConsumer.end_parameters</a>
</dt>
</dl>
</td></tr></table>
</div>
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