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<h1 class="epydoc">Identifier Index</h1>
</td><td>
[
<a href="identifier-index-A.html">A</a>
<a href="identifier-index-B.html">B</a>
<a href="identifier-index-C.html">C</a>
<a href="identifier-index-D.html">D</a>
<a href="identifier-index-E.html">E</a>
<a href="identifier-index-F.html">F</a>
<a href="identifier-index-G.html">G</a>
<a href="identifier-index-H.html">H</a>
<a href="identifier-index-I.html">I</a>
<a href="identifier-index-J.html">J</a>
<a href="identifier-index-K.html">K</a>
<a href="identifier-index-L.html">L</a>
<a href="identifier-index-M.html">M</a>
<a href="identifier-index-N.html">N</a>
<a href="identifier-index-O.html">O</a>
<a href="identifier-index-P.html">P</a>
<a href="identifier-index-Q.html">Q</a>
<a href="identifier-index-R.html">R</a>
<a href="identifier-index-S.html">S</a>
<a href="identifier-index-T.html">T</a>
<a href="identifier-index-U.html">U</a>
<a href="identifier-index-V.html">V</a>
<a href="identifier-index-W.html">W</a>
<a href="identifier-index-X.html">X</a>
<a href="identifier-index-Y.html">Y</a>
<a href="identifier-index-Z.html">Z</a>
<a href="identifier-index-_.html">_</a>
]
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<table border="0" width="100%">
<tr valign="top"><td valign="top" width="1%"><h2 class="epydoc"><a name="U">U</a></h2></td>
<td valign="top">
<table class="link-index" width="100%" border="1">
<tr>
<td width="33%" class="link-index"><a href="Bio.Restriction.Restriction.UbaF11I-class.html">UbaF11I</a><br />
<span class="index-where">(in <a href="Bio.Restriction.Restriction-module.html">Bio.Restriction.Restriction</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.PDB.Selection-module.html#unfold_entities">unfold_entities()</a><br />
<span class="index-where">(in <a href="Bio.PDB.Selection-module.html">Bio.PDB.Selection</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.Nexus.Trees.Tree-class.html#unroot">unroot()</a><br />
<span class="index-where">(in <a href="Bio.Nexus.Trees.Tree-class.html">Tree</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="Bio.Restriction.Restriction.UbaF12I-class.html">UbaF12I</a><br />
<span class="index-where">(in <a href="Bio.Restriction.Restriction-module.html">Bio.Restriction.Restriction</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.Seq.Seq-class.html#ungap">ungap()</a><br />
<span class="index-where">(in <a href="Bio.Seq.Seq-class.html">Seq</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.GenBank.LocationParser.UnsignedInteger-class.html">UnsignedInteger</a><br />
<span class="index-where">(in <a href="Bio.GenBank.LocationParser-module.html">Bio.GenBank.LocationParser</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="Bio.Restriction.Restriction.UbaF13I-class.html">UbaF13I</a><br />
<span class="index-where">(in <a href="Bio.Restriction.Restriction-module.html">Bio.Restriction.Restriction</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.Seq.UnknownSeq-class.html#ungap">ungap()</a><br />
<span class="index-where">(in <a href="Bio.Seq.UnknownSeq-class.html">UnknownSeq</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.DocSQL.Update-class.html">Update</a><br />
<span class="index-where">(in <a href="Bio.DocSQL-module.html">Bio.DocSQL</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="Bio.Restriction.Restriction.UbaF14I-class.html">UbaF14I</a><br />
<span class="index-where">(in <a href="Bio.Restriction.Restriction-module.html">Bio.Restriction.Restriction</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.ParserSupport.TaggingConsumer-class.html#unhandled">unhandled()</a><br />
<span class="index-where">(in <a href="Bio.ParserSupport.TaggingConsumer-class.html">TaggingConsumer</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.Restriction._Update.Update-module.html">Update</a><br />
<span class="index-where">(in <a href="Bio.Restriction._Update-module.html">Bio.Restriction._Update</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="Bio.Restriction.Restriction.UbaF9I-class.html">UbaF9I</a><br />
<span class="index-where">(in <a href="Bio.Restriction.Restriction-module.html">Bio.Restriction.Restriction</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.ParserSupport.TaggingConsumer-class.html#unhandled_section">unhandled_section()</a><br />
<span class="index-where">(in <a href="Bio.ParserSupport.TaggingConsumer-class.html">TaggingConsumer</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.Index._InMemoryIndex-class.html#update">update()</a><br />
<span class="index-where">(in <a href="Bio.Index._InMemoryIndex-class.html">_InMemoryIndex</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="Bio.Restriction.Restriction.UbaPI-class.html">UbaPI</a><br />
<span class="index-where">(in <a href="Bio.Restriction.Restriction-module.html">Bio.Restriction.Restriction</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.Entrez.Parser.UnicodeElement-class.html">UnicodeElement</a><br />
<span class="index-where">(in <a href="Bio.Entrez.Parser-module.html">Bio.Entrez.Parser</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.NeuralNetwork.BackPropagation.Layer.HiddenLayer-class.html#update">update()</a><br />
<span class="index-where">(in <a href="Bio.NeuralNetwork.BackPropagation.Layer.HiddenLayer-class.html">HiddenLayer</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="Bio.Affy.CelFile-module.html#UFUNC_BUFSIZE_DEFAULT">UFUNC_BUFSIZE_DEFAULT</a><br />
<span class="index-where">(in <a href="Bio.Affy.CelFile-module.html">Bio.Affy.CelFile</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.GA.Crossover.Uniform-module.html">Uniform</a><br />
<span class="index-where">(in <a href="Bio.GA.Crossover-module.html">Bio.GA.Crossover</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.NeuralNetwork.BackPropagation.Layer.InputLayer-class.html#update">update()</a><br />
<span class="index-where">(in <a href="Bio.NeuralNetwork.BackPropagation.Layer.InputLayer-class.html">InputLayer</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="Bio.Affy.CelFile-module.html#UFUNC_PYVALS_NAME">UFUNC_PYVALS_NAME</a><br />
<span class="index-where">(in <a href="Bio.Affy.CelFile-module.html">Bio.Affy.CelFile</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.GA.Crossover.Uniform.UniformCrossover-class.html">UniformCrossover</a><br />
<span class="index-where">(in <a href="Bio.GA.Crossover.Uniform-module.html">Bio.GA.Crossover.Uniform</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.NeuralNetwork.BackPropagation.Layer.OutputLayer-class.html#update">update()</a><br />
<span class="index-where">(in <a href="Bio.NeuralNetwork.BackPropagation.Layer.OutputLayer-class.html">OutputLayer</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="Bio.UniGene-module.html#UG_INDENT">UG_INDENT</a><br />
<span class="index-where">(in <a href="Bio.UniGene-module.html">Bio.UniGene</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.UniGene-module.html">UniGene</a><br />
<span class="index-where">(in <a href="Bio-module.html">Bio</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.Restriction._Update.Update.RebaseUpdate-class.html#update">update()</a><br />
<span class="index-where">(in <a href="Bio.Restriction._Update.Update.RebaseUpdate-class.html">RebaseUpdate</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="Bio.Alphabet.IUPAC-module.html#unambiguous_dna">unambiguous_dna</a><br />
<span class="index-where">(in <a href="Bio.Alphabet.IUPAC-module.html">Bio.Alphabet.IUPAC</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.UniGene.UniGene-module.html">UniGene</a><br />
<span class="index-where">(in <a href="Bio.UniGene-module.html">Bio.UniGene</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.SeqIO._index._IndexedSeqFileDict-class.html#update">update()</a><br />
<span class="index-where">(in <a href="Bio.SeqIO._index._IndexedSeqFileDict-class.html" onclick="show_private();">_IndexedSeqFileDict</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="Bio.Data.CodonTable-module.html#unambiguous_dna_by_id">unambiguous_dna_by_id</a><br />
<span class="index-where">(in <a href="Bio.Data.CodonTable-module.html">Bio.Data.CodonTable</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.UniGene.UniGene-module.html#unigene_parser">unigene_parser</a><br />
<span class="index-where">(in <a href="Bio.UniGene.UniGene-module.html">Bio.UniGene.UniGene</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.SeqRecord._RestrictedDict-class.html#update">update()</a><br />
<span class="index-where">(in <a href="Bio.SeqRecord._RestrictedDict-class.html" onclick="show_private();">_RestrictedDict</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="Bio.Data.CodonTable-module.html#unambiguous_dna_by_name">unambiguous_dna_by_name</a><br />
<span class="index-where">(in <a href="Bio.Data.CodonTable-module.html">Bio.Data.CodonTable</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.UniGene.UniGene.UniGeneParser-class.html">UniGeneParser</a><br />
<span class="index-where">(in <a href="Bio.UniGene.UniGene-module.html">Bio.UniGene.UniGene</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.HMM.Trainer.BaumWelchTrainer-class.html#update_emissions">update_emissions()</a><br />
<span class="index-where">(in <a href="Bio.HMM.Trainer.BaumWelchTrainer-class.html">BaumWelchTrainer</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="Bio.Data.IUPACData-module.html#unambiguous_dna_letters">unambiguous_dna_letters</a><br />
<span class="index-where">(in <a href="Bio.Data.IUPACData-module.html">Bio.Data.IUPACData</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.UniGene.UnigeneProtsimRecord-class.html">UnigeneProtsimRecord</a><br />
<span class="index-where">(in <a href="Bio.UniGene-module.html">Bio.UniGene</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.PDB.PDBList%27.PDBList-class.html#update_pdb">update_pdb()</a><br />
<span class="index-where">(in <a href="Bio.PDB.PDBList%27.PDBList-class.html">PDBList</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="Bio.Data.IUPACData-module.html#unambiguous_dna_weight_ranges">unambiguous_dna_weight_ranges</a><br />
<span class="index-where">(in <a href="Bio.Data.IUPACData-module.html">Bio.Data.IUPACData</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.UniGene.UnigeneRecord-class.html">UnigeneRecord</a><br />
<span class="index-where">(in <a href="Bio.UniGene-module.html">Bio.UniGene</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.HMM.Trainer.BaumWelchTrainer-class.html#update_transitions">update_transitions()</a><br />
<span class="index-where">(in <a href="Bio.HMM.Trainer.BaumWelchTrainer-class.html">BaumWelchTrainer</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="Bio.Data.IUPACData-module.html#unambiguous_dna_weights">unambiguous_dna_weights</a><br />
<span class="index-where">(in <a href="Bio.Data.IUPACData-module.html">Bio.Data.IUPACData</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.UniGene.UnigeneSequenceRecord-class.html">UnigeneSequenceRecord</a><br />
<span class="index-where">(in <a href="Bio.UniGene-module.html">Bio.UniGene</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.Seq.Seq-class.html#upper">upper()</a><br />
<span class="index-where">(in <a href="Bio.Seq.Seq-class.html">Seq</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="Bio.Alphabet.IUPAC-module.html#unambiguous_rna">unambiguous_rna</a><br />
<span class="index-where">(in <a href="Bio.Alphabet.IUPAC-module.html">Bio.Alphabet.IUPAC</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.UniGene.UnigeneSTSRecord-class.html">UnigeneSTSRecord</a><br />
<span class="index-where">(in <a href="Bio.UniGene-module.html">Bio.UniGene</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.Seq.UnknownSeq-class.html#upper">upper()</a><br />
<span class="index-where">(in <a href="Bio.Seq.UnknownSeq-class.html">UnknownSeq</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="Bio.Data.CodonTable-module.html#unambiguous_rna_by_id">unambiguous_rna_by_id</a><br />
<span class="index-where">(in <a href="Bio.Data.CodonTable-module.html">Bio.Data.CodonTable</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.Pathway.Rep.HashSet.HashSet-class.html#union">union()</a><br />
<span class="index-where">(in <a href="Bio.Pathway.Rep.HashSet.HashSet-class.html">HashSet</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.SeqRecord.SeqRecord-class.html#upper">upper()</a><br />
<span class="index-where">(in <a href="Bio.SeqRecord.SeqRecord-class.html">SeqRecord</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="Bio.Data.CodonTable-module.html#unambiguous_rna_by_name">unambiguous_rna_by_name</a><br />
<span class="index-where">(in <a href="Bio.Data.CodonTable-module.html">Bio.Data.CodonTable</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.SeqIO.UniprotIO-module.html">UniprotIO</a><br />
<span class="index-where">(in <a href="Bio.SeqIO-module.html">Bio.SeqIO</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.Phylo.PhyloXML.Uri-class.html">Uri</a><br />
<span class="index-where">(in <a href="Bio.Phylo.PhyloXML-module.html">Bio.Phylo.PhyloXML</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="Bio.Data.IUPACData-module.html#unambiguous_rna_letters">unambiguous_rna_letters</a><br />
<span class="index-where">(in <a href="Bio.Data.IUPACData-module.html">Bio.Data.IUPACData</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.SeqIO.UniprotIO-module.html#UniprotIterator">UniprotIterator()</a><br />
<span class="index-where">(in <a href="Bio.SeqIO.UniprotIO-module.html">Bio.SeqIO.UniprotIO</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.Phylo.PhyloXMLIO-module.html#uri">uri</a><br />
<span class="index-where">(in <a href="Bio.Phylo.PhyloXMLIO-module.html">Bio.Phylo.PhyloXMLIO</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="Bio.Data.IUPACData-module.html#unambiguous_rna_weight_ranges">unambiguous_rna_weight_ranges</a><br />
<span class="index-where">(in <a href="Bio.Data.IUPACData-module.html">Bio.Data.IUPACData</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.SeqIO._index.UniprotRandomAccess-class.html">UniprotRandomAccess</a><br />
<span class="index-where">(in <a href="Bio.SeqIO._index-module.html">Bio.SeqIO._index</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.Phylo.PhyloXMLIO.Parser-class.html#uri">uri()</a><br />
<span class="index-where">(in <a href="Bio.Phylo.PhyloXMLIO.Parser-class.html">Parser</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="Bio.Data.IUPACData-module.html#unambiguous_rna_weights">unambiguous_rna_weights</a><br />
<span class="index-where">(in <a href="Bio.Data.IUPACData-module.html">Bio.Data.IUPACData</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.PDB.Selection-module.html#uniqueify">uniqueify()</a><br />
<span class="index-where">(in <a href="Bio.PDB.Selection-module.html">Bio.PDB.Selection</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.Phylo.PhyloXMLIO.Writer-class.html#uri">uri()</a><br />
<span class="index-where">(in <a href="Bio.Phylo.PhyloXMLIO.Writer-class.html">Writer</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="Bio.Restriction.Restriction.UnbI-class.html">UnbI</a><br />
<span class="index-where">(in <a href="Bio.Restriction.Restriction-module.html">Bio.Restriction.Restriction</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.Restriction.Restriction.Unknown-class.html">Unknown</a><br />
<span class="index-where">(in <a href="Bio.Restriction.Restriction-module.html">Bio.Restriction.Restriction</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.HMM.Utilities-module.html">Utilities</a><br />
<span class="index-where">(in <a href="Bio.HMM-module.html">Bio.HMM</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="Bio.SeqFeature.UncertainPosition-class.html">UncertainPosition</a><br />
<span class="index-where">(in <a href="Bio.SeqFeature-module.html">Bio.SeqFeature</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.SeqFeature.UnknownPosition-class.html">UnknownPosition</a><br />
<span class="index-where">(in <a href="Bio.SeqFeature-module.html">Bio.SeqFeature</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.GenBank.utils-module.html">utils</a><br />
<span class="index-where">(in <a href="Bio.GenBank-module.html">Bio.GenBank</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="Bio.UniGene.UniGene-module.html#undo_handle">undo_handle</a><br />
<span class="index-where">(in <a href="Bio.UniGene.UniGene-module.html">Bio.UniGene.UniGene</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.Seq.UnknownSeq-class.html">UnknownSeq</a><br />
<span class="index-where">(in <a href="Bio.Seq-module.html">Bio.Seq</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.PopGen.FDist.Utils-module.html">Utils</a><br />
<span class="index-where">(in <a href="Bio.PopGen.FDist-module.html">Bio.PopGen.FDist</a>)</span></td>
</tr>
<tr>
<td width="33%" class="link-index"><a href="Bio.File.UndoHandle-class.html">UndoHandle</a></td>
<td width="33%" class="link-index"><a href="Bio.Nexus.Nodes.Chain-class.html#unlink">unlink()</a><br />
<span class="index-where">(in <a href="Bio.Nexus.Nodes.Chain-class.html">Chain</a>)</span></td>
<td width="33%" class="link-index"><a href="Bio.PopGen.GenePop.Utils-module.html">Utils</a><br />
<span class="index-where">(in <a href="Bio.PopGen.GenePop-module.html">Bio.PopGen.GenePop</a>)</span></td>
</tr>
</table>
</td></tr>
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// Private objects are initially displayed (because if
// javascript is turned off then we want them to be
// visible); but by default, we want to hide them. So hide
// them unless we have a cookie that says to show them.
checkCookie();
// -->
</script>
</body>
</html>
