<?xml version="1.0" encoding="ascii"?> <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "DTD/xhtml1-transitional.dtd"> <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en"> <head> <title>Applications</title> <link rel="stylesheet" href="epydoc.css" type="text/css" /> <script type="text/javascript" src="epydoc.js"></script> </head> <body bgcolor="white" text="black" link="blue" vlink="#204080" alink="#204080"> <h1 class="toc">Module Applications</h1> <hr /> <h2 class="toc">Classes</h2> <a target="mainFrame" href="Bio.Blast.Applications.BlastallCommandline-class.html" >BlastallCommandline</a><br /> <a target="mainFrame" href="Bio.Blast.Applications.BlastpgpCommandline-class.html" >BlastpgpCommandline</a><br /> <a target="mainFrame" href="Bio.Blast.Applications.FastacmdCommandline-class.html" >FastacmdCommandline</a><br /> <a target="mainFrame" href="Bio.Blast.Applications.NcbiblastformatterCommandline-class.html" >NcbiblastformatterCommandline</a><br /> <a target="mainFrame" href="Bio.Blast.Applications.NcbiblastnCommandline-class.html" >NcbiblastnCommandline</a><br /> <a target="mainFrame" href="Bio.Blast.Applications.NcbiblastpCommandline-class.html" >NcbiblastpCommandline</a><br /> <a target="mainFrame" href="Bio.Blast.Applications.NcbiblastxCommandline-class.html" >NcbiblastxCommandline</a><br /> <a target="mainFrame" href="Bio.Blast.Applications.NcbipsiblastCommandline-class.html" >NcbipsiblastCommandline</a><br /> <a target="mainFrame" href="Bio.Blast.Applications.NcbirpsblastCommandline-class.html" >NcbirpsblastCommandline</a><br /> <a target="mainFrame" href="Bio.Blast.Applications.NcbirpstblastnCommandline-class.html" >NcbirpstblastnCommandline</a><br /> <a target="mainFrame" href="Bio.Blast.Applications.NcbitblastnCommandline-class.html" >NcbitblastnCommandline</a><br /> <a target="mainFrame" href="Bio.Blast.Applications.NcbitblastxCommandline-class.html" >NcbitblastxCommandline</a><br /> <a target="mainFrame" href="Bio.Blast.Applications.RpsBlastCommandline-class.html" >RpsBlastCommandline</a><br /> <div class="private"> <a target="mainFrame" href="Bio.Blast.Applications._BlastAllOrPgpCommandLine-class.html" >_BlastAllOrPgpCommandLine</a><br /> </div> <div class="private"> <a target="mainFrame" href="Bio.Blast.Applications._BlastCommandLine-class.html" >_BlastCommandLine</a><br /> </div> <div class="private"> <a target="mainFrame" href="Bio.Blast.Applications._NcbibaseblastCommandline-class.html" >_NcbibaseblastCommandline</a><br /> </div> <div class="private"> <a target="mainFrame" href="Bio.Blast.Applications._Ncbiblast2SeqCommandline-class.html" >_Ncbiblast2SeqCommandline</a><br /> </div> <div class="private"> <a target="mainFrame" href="Bio.Blast.Applications._NcbiblastCommandline-class.html" >_NcbiblastCommandline</a><br /> </div> <div class="private"> <a target="mainFrame" href="Bio.Blast.Applications._NcbiblastMain2SeqCommandline-class.html" >_NcbiblastMain2SeqCommandline</a><br /> </div> <h2 class="toc">Functions</h2> <div class="private"> <a target="mainFrame" href="Bio.Blast.Applications-module.html#_test" >_test</a><br /> </div> <h2 class="toc">Variables</h2> <a target="mainFrame" href="Bio.Blast.Applications-module.html#__package__" >__package__</a><br /><hr /> <span class="options">[<a href="javascript:void(0);" class="privatelink" onclick="toggle_private();">hide private</a>]</span> <script type="text/javascript"> <!-- // Private objects are initially displayed (because if // javascript is turned off then we want them to be // visible); but by default, we want to hide them. So hide // them unless we have a cookie that says to show them. checkCookie(); // --> </script> </body> </html>