<?xml version="1.0" encoding="ascii"?> <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "DTD/xhtml1-transitional.dtd"> <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en"> <head> <title>SffIO</title> <link rel="stylesheet" href="epydoc.css" type="text/css" /> <script type="text/javascript" src="epydoc.js"></script> </head> <body bgcolor="white" text="black" link="blue" vlink="#204080" alink="#204080"> <h1 class="toc">Module SffIO</h1> <hr /> <h2 class="toc">Classes</h2> <a target="mainFrame" href="Bio.SeqIO.SffIO.SffWriter-class.html" >SffWriter</a><br /> <div class="private"> <a target="mainFrame" href="Bio.SeqIO.SffIO._AddTellHandle-class.html" >_AddTellHandle</a><br /> </div> <h2 class="toc">Functions</h2> <a target="mainFrame" href="Bio.SeqIO.SffIO-module.html#ReadRocheXmlManifest" >ReadRocheXmlManifest</a><br /> <a target="mainFrame" href="Bio.SeqIO.SffIO-module.html#SffIterator" >SffIterator</a><br /> <div class="private"> <a target="mainFrame" href="Bio.SeqIO.SffIO-module.html#_SffTrimIterator" >_SffTrimIterator</a><br /> </div> <div class="private"> <a target="mainFrame" href="Bio.SeqIO.SffIO-module.html#_sff_do_slow_index" >_sff_do_slow_index</a><br /> </div> <div class="private"> <a target="mainFrame" href="Bio.SeqIO.SffIO-module.html#_sff_file_header" >_sff_file_header</a><br /> </div> <div class="private"> <a target="mainFrame" href="Bio.SeqIO.SffIO-module.html#_sff_find_roche_index" >_sff_find_roche_index</a><br /> </div> <div class="private"> <a target="mainFrame" href="Bio.SeqIO.SffIO-module.html#_sff_read_raw_record" >_sff_read_raw_record</a><br /> </div> <div class="private"> <a target="mainFrame" href="Bio.SeqIO.SffIO-module.html#_sff_read_roche_index" >_sff_read_roche_index</a><br /> </div> <div class="private"> <a target="mainFrame" href="Bio.SeqIO.SffIO-module.html#_sff_read_roche_index_xml" >_sff_read_roche_index_xml</a><br /> </div> <div class="private"> <a target="mainFrame" href="Bio.SeqIO.SffIO-module.html#_sff_read_seq_record" >_sff_read_seq_record</a><br /> </div> <h2 class="toc">Variables</h2> <a target="mainFrame" href="Bio.SeqIO.SffIO-module.html#__package__" >__package__</a><br /> <div class="private"> <a target="mainFrame" href="Bio.SeqIO.SffIO-module.html#_flag" >_flag</a><br /> </div> <div class="private"> <a target="mainFrame" href="Bio.SeqIO.SffIO-module.html#_hsh" >_hsh</a><br /> </div> <div class="private"> <a target="mainFrame" href="Bio.SeqIO.SffIO-module.html#_mft" >_mft</a><br /> </div> <div class="private"> <a target="mainFrame" href="Bio.SeqIO.SffIO-module.html#_null" >_null</a><br /> </div> <div class="private"> <a target="mainFrame" href="Bio.SeqIO.SffIO-module.html#_sff" >_sff</a><br /> </div> <div class="private"> <a target="mainFrame" href="Bio.SeqIO.SffIO-module.html#_srt" >_srt</a><br /> </div> <hr /> <span class="options">[<a href="javascript:void(0);" class="privatelink" onclick="toggle_private();">hide private</a>]</span> <script type="text/javascript"> <!-- // Private objects are initially displayed (because if // javascript is turned off then we want them to be // visible); but by default, we want to hide them. So hide // them unless we have a cookie that says to show them. checkCookie(); // --> </script> </body> </html>