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<a href="Bio-module.html">Package Bio</a> ::
<a href="Bio.GA-module.html">Package GA</a> ::
<a href="Bio.GA.Mutation-module.html">Package Mutation</a> ::
<a href="Bio.GA.Mutation.Simple-module.html">Module Simple</a> ::
Class ConversionMutation
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<!-- ==================== CLASS DESCRIPTION ==================== -->
<h1 class="epydoc">Class ConversionMutation</h1><p class="nomargin-top"><span class="codelink"><a href="Bio.GA.Mutation.Simple-pysrc.html#ConversionMutation">source code</a></span></p>
<pre class="base-tree">
object --+
|
<strong class="uidshort">ConversionMutation</strong>
</pre>
<hr />
<p>Potentially mutate any item to another in the alphabet.</p>
<p>This just performs switching mutation -- changing one gene of a genome
to any other potential gene, at some defined frequency. If the organism
is determined to mutate, then the alphabet item it is equally likely to
switch to any other letter in the alphabet.</p>
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<td><span class="summary-sig"><a href="Bio.GA.Mutation.Simple.ConversionMutation-class.html#__init__" class="summary-sig-name">__init__</a>(<span class="summary-sig-arg">self</span>,
<span class="summary-sig-arg">mutation_rate</span>=<span class="summary-sig-default">0.001</span>)</span><br />
Inititialize a mutator.</td>
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<td><span class="summary-sig"><a name="mutate"></a><span class="summary-sig-name">mutate</span>(<span class="summary-sig-arg">self</span>,
<span class="summary-sig-arg">organism</span>)</span><br />
Mutate the organisms genome.</td>
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<span class="codelink"><a href="Bio.GA.Mutation.Simple-pysrc.html#ConversionMutation.mutate">source code</a></span>
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<p class="indent-wrapped-lines"><b>Inherited from <code>object</code></b>:
<code>__delattr__</code>,
<code>__format__</code>,
<code>__getattribute__</code>,
<code>__hash__</code>,
<code>__new__</code>,
<code>__reduce__</code>,
<code>__reduce_ex__</code>,
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<code>__setattr__</code>,
<code>__sizeof__</code>,
<code>__str__</code>,
<code>__subclasshook__</code>
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<p class="indent-wrapped-lines"><b>Inherited from <code>object</code></b>:
<code>__class__</code>
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<h3 class="epydoc"><span class="sig"><span class="sig-name">__init__</span>(<span class="sig-arg">self</span>,
<span class="sig-arg">mutation_rate</span>=<span class="sig-default">0.001</span>)</span>
<br /><em class="fname">(Constructor)</em>
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</td><td align="right" valign="top"
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<p>Inititialize a mutator.</p>
<p>Arguments:</p>
<p>o mutation_rate -- The chance of a mutation happening at any position
in the genome.</p>
<dl class="fields">
<dt>Overrides:
object.__init__
</dt>
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