/*=========================================================================

  Program: GDCM (Grassroots DICOM). A DICOM library
  Module:  $URL$

  Copyright (c) 2006-2010 Mathieu Malaterre
  All rights reserved.
  See Copyright.txt or http://gdcm.sourceforge.net/Copyright.html for details.

     This software is distributed WITHOUT ANY WARRANTY; without even
     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
     PURPOSE.  See the above copyright notice for more information.

=========================================================================*/

/*
 * This example will take in a DICOM file, and tries to decompress it (actually write it
 * as ImplicitVRLittleEndian Transfer Syntax).
 *
 * Compilation: 
 * $ CLASSPATH=gdcm.jar javac -source 1.5 ../../trunk/Examples/Java/DecompressPixmap.java -d .
 *
 * Usage: 
 * $ LD_LIBRARY_PATH=. CLASSPATH=gdcm.jar:. java DecompressPixmap ~/Creatis/gdcmData/012345.002.050.dcm  out.dcm
 */
import gdcm.*;

public class DecompressPixmap
{
  public static void main(String[] args) throws Exception
    {
    String file1 = args[0];
    String file2 = args[1];
    //PixmapReader reader = new PixmapReader();
    ImageReader reader = new ImageReader();
    reader.SetFileName( file1 );
    boolean ret = reader.Read();
    if( !ret )
      {
      throw new Exception("Could not read: " + file1 );
      }

    ImageChangeTransferSyntax change = new ImageChangeTransferSyntax();
    change.SetTransferSyntax( new TransferSyntax(TransferSyntax.TSType.ImplicitVRLittleEndian) );
    change.SetInput( reader.GetPixmap() );
    if( !change.Change() )
      {
      throw new Exception("Could not change: " + file1 );
      }

    // When using a PixmapReader the following code crashes, I do not understand why (MM)
    // Instead hack our way in, and use an ImageReader instead of a PixmapReader
    //
    // Hum looks like Java Covariant Return type is not working for some reason
    Pixmap out = ((PixmapToPixmapFilter)change).GetOutput();
    System.out.println( out.toString() );

    // Set the Source Application Entity Title
    FileMetaInformation.SetSourceApplicationEntityTitle( "Just For Fun" );

    PixmapWriter writer = new PixmapWriter();
    writer.SetFileName( file2 );
    writer.SetFile( reader.GetFile() );
    writer.SetImage( out );
    ret = writer.Write();
    if( !ret )
      {
      throw new Exception("Could not write: " + file2 );
      }
    
    }
}