# Document $Id: ChangeLog,v 1.98 2007/02/05 00:36:55 dleidert Exp $ # Summary File changelog for the chemical-mime-data project. 2007-02-04 Daniel Leidert <daniel.leidert@wgdd.de> * NEWS: Final 0.1.94 release. 2007-02-04 Daniel Leidert <daniel.leidert@wgdd.de> * html_docs/Makefile.am (install-sfnet): Fixed pre-requisite. 2007-02-04 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in (chemical/x-cactvs-binary) (chemical/x-cdx, chemical/x-gamess-output, chemical/x-gcg8-sequence) (chemical/x-kinemage, chemical/x-ncbi-asn1): Improved magic pattern. Newlines abd byte-sequences have been replaced by appropriate code. 2007-02-02 Daniel Leidert <daniel.leidert@wgdd.de> * THANKS: Updated. Added dedication to CambridgeSoft Technical Support. * chemical-mime-data.pc.in: Added some more stuff and a header. (exec_prefix, libdir, includedir, Libs, Cflags): Removed (see https://bugzilla.redhat.com/bugzilla/show_bug.cgi?id=225095). Thanks to Ville Skyttä and Julian Sikorski (closes RH #225095 and sf.net #1616568). * configure.ac: Check, if PKG_CHECK_EXISTS is defined and make a safe fallback if not. This fixes a compilation issue with older intltool versions and hardens the configure script. Further define several locations, if they were not defined via autoconf (necessary for the pkg-config file). * html_docs/Makefile.am (htmldocsdir, htmldocs_DATA) (dist_htmldocs_DATA): Changed to use htmldir, that can be changed by the user with the --htmldir configure option (autoconf 2.60). * po/Makevars: Added builddir variable to make intltool-* tools stop complaining. 2007-01-29 Daniel Leidert <daniel.leidert@wgdd.de> * html_docs/Makefile.am (EXTRA_DIST, htmldocs_DATA): * icons/pixmaps/Makefile.am (EXTRA_DIST, pixmaps_list) (pixmaps_DATA): Changed to use dist_ prefix. Makes the files smaller. 2007-01-29 Daniel Leidert <daniel.leidert@wgdd.de> * html_docs/index.html: Improved markup. 2007-01-29 Daniel Leidert <daniel.leidert@wgdd.de> * html_docs/index.html: Added missing acronym/abbreviation tags. 2007-01-29 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in: Initially added (currently not activated) application/x-chemtool, application/x-ghemical, chemical/x-turbomole-basis, chemical/x-turbomole-control, chemical/x-turbomole-coord, chemical/x-turbomole-grad, chemical/x-turbomole-input, chemical/x-turbomole-jbas, chemical/x-turbomole-scfmo and chemical/x-turbomole-vibrational MIME types. (chemical/x-gaussian-input): Added more specific specification URL. (chemical/x-inchi, chemical/x-inchi-xml): Added specification URL. (chemical/x-inchi-xml): Added some magic. (chemical/x-pdb): Added specification URL and removed a useless one. (chemical/x-xyz): Added some specification URL with a short format explanation. 2007-01-28 Daniel Leidert <daniel.leidert@wgdd.de> * TODO: Updated. * src/chemical-mime-database.xml.in (chemical/x-fasta): Added magic pattern and specification URL. (chemical/x-embl-dl-nucleotide): Added specification URL. (chemical/x-genbank): Fixed detection rules based on specification from www.psc.edu. 2007-01-28 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in (chemical/x-daylight-smiles): Fixed specification URL. 2007-01-28 Daniel Leidert <daniel.leidert@wgdd.de> * HACKING: Fixed typo. * html_docs/Makefile.am (install-sfnet): Fixed typo. 2007-01-28 Daniel Leidert <daniel.leidert@wgdd.de> * Makefile.am: * html_docs/Makefile.am: Added a target install-sfnet to copy the files to sourceforge.net via scp. * freedesktop.org/Makefile.am (vpath, chemical-mime-data.xml): * gnome/Makefile.am (vpath, chemical-mime-data.keys) (chemical-mime-data.mime): * html_docs/Makefile.am (vpath, chemical-mime-data.html): * kde/Makefile.am (vpath, *.desktop): Replaced vpath directives with VPATH variables. Removed GNU make text processing functions to avoid portability warnings. Removed the cmd_common.xsl prerequisite too, to allow the last step. * icons/hicolor/Makefile.am (.svgz): Moved over to an old-fashioned suffix rule to avoid portability warnings. * src/Makefile.am (check-local): Moved GNU make control functions to simple echo calls to avoid portability warnings. 2007-01-28 Daniel Leidert <daniel.leidert@wgdd.de> * README: * html_docs/index.html: Synced both files. Added and completed content. * TODO: Removed README related item. 2007-01-27 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in: Initially added (currently not activated) chemical/x-fasta and chemical/x-mopac-vib. (chemical/seq-aa-fasta, chemical/seq-na-fasta): Moved the generic extensions to the chemical/x-fasta MIME type. (chemical/x-cerius): Added missing conflicts to application/x-x509-ca-cert. * xsl/cmd_website.xsl: Added a template html.content.references to add references links to the tabled overview. (html.content.head): Added an overview of the different sections for easier navigation. (html.content.table.mime.supported) (html.content.table.mime.unsupported): Added IDs for h2 tags. 2007-01-27 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in: Initially added (currently not activated) chemical/seq-aa-fasta, chemical/seq-aa-genpept, chemical/seq-na-fasta. (chemical/x-genbank): Added alias and specification URL for the alias. * xsl/cmd_website.xsl (chemical-mime): Changed to filename without the leading `./'. (html.content.table.mime.unsupported): Fixed sorting. 2007-01-27 Daniel Leidert <daniel.leidert@wgdd.de> * README: Updated and completed. * html_docs/index.html: Ditto. This seems to be a first complete proposal. 2007-01-27 Daniel Leidert <daniel.leidert@wgdd.de> * HACKING: Completed content. * NEWS: Completed for the 0.1.94 release. * TODO: Removed HACKING item. 2007-01-27 Daniel Leidert <daniel.leidert@wgdd.de> * xsl/cmd_common.xsl: Renamed exslt extension prefix accordingly to http://www.exslt.org/exsl/elements/document/index.html. * xsl/cmd_website.xsl: Removed exslt extension (prefix). 2007-01-27 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in (chemical/x-cxf): Improved description wording. 2007-01-27 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in (chemical/x-compass): Improved wording. (chemical/x-csml): Added acronym/expanded-acronym combination for CSML. 2007-01-27 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in: Removed all empty icon tags after fixing the DTD and the stylesheets. Added the following currently not activated MIME types: chemical/x-chemdraw, chemical/x-compass, chemical/x-crossfire, chemical/x-csml, chemical/x-cxf, chemical/x-embl-dl-nucleotide, chemical/x-galactic-spc, chemical/x-gaussian-checkpoint, chemical/x-gaussian-cube, chemical/x-gcg8-sequence, chemical/x-isostar, chemical/x-kinemage, chemical/x-macmolecule, chemical/x-mif, chemical/x-molconn-Z, chemical/x-rosdal, chemical/x-swissprot, chemical/x-vamas-iso14976 and chemical/x-xtel. (conflicts): Added an fdo attribute for conflicts with the fd.o database. (specification): Renamed the resource attribute to title. (chemical/x-cache, chemical/x-cache-csf): Moved (alphabetical order). (chemical/x-cif, chemical/x-mmcif): Removed unused spec-links. (chemical/x-genbank): Added magic pattern found in spec. (chemical/x-mol2): Added two file extensions found via WWW search. (chemical/x-test): Extended test entry. * xsl/cmd_freedesktop_org.xsl (chemical-mime): Fixed XPath expression introduced by the earlier change (revision 1.8), that now lead to a broken (almost empty) shared-mime-info database file. * xsl/cmd_website.xsl (specification): Fixed after DTD change. (html.content.table.mime.unsupported): Improved wording. 2007-01-26 Daniel Leidert <daniel.leidert@wgdd.de> * html_docs/cmd.css: Added some styling for h2 and tr tags. (table, td, th): Improved border styling. (td, th): Improved space to border. 2007-01-26 Daniel Leidert <daniel.leidert@wgdd.de> * AUTHORS: Just fixed the file description. * README: Removed a useless space. 2007-01-26 Daniel Leidert <daniel.leidert@wgdd.de> * xsl/cmd_common.xsl: * xsl/cmd_freedesktop_org.xsl: * xsl/cmd_gnome-keys.xsl: * xsl/cmd_gnome-mime.xsl: * xsl/cmd_kde.xsl: Added a lot of comments for a better internal documentation. * xsl/cmd_common.xsl: (xmlns:xalanredirect) (extension-element-prefixes): Changed xalanredirect namespace and prefix to make the spec at http://xml.apache.org/xalan-j/apidocs/org/apache/xalan/lib/Redirect.html. (header.desktop): Moved to xsl/cmd_kde.xsl (and renamed to kde.desktop.header). (header.text, header.xml): Renamed to common.header.text and common.header.xml. (write.chunk): Renamed to common.write.chunk. Adjusted xalanredirect prefix. * xsl/cmd_freedesktop_org.xsl (chemical-mime): * xsl/cmd_gnome-keys.xsl (chemical-mime): * xsl/cmd_gnome-mime.xsl (chemical-mime): * xsl/cmd_kde.xsl (chemical-mime): * xsl/cmd_website.xsl (chemical-mime): Adjusted common template names after changes to xsl/cmd_common.xsl. * xsl/cmd_freedesktop_org.xsl (chemical-mime, mime-type): * xsl/cmd_gnome-keys.xsl (chemical-mime, mime-type): * xsl/cmd_gnome-mime.xsl (chemical-mime, mime-type): * xsl/cmd_kde.xsl (chemical-mime, mime-type): Improved selection of "supported" nodes, so this stuff could be removed in the mime-type template. * xsl/cmd_gnome-keys.xsl (mime-type): * xsl/cmd_kde.xsl (mime-type): Added a call to gnome.keys.generic.icon respectively kde.desktop.generic.icon and the related template to handle the case, if no icon node was found. * xsl/cmd_gnome-keys.xsl (comment): * xsl/cmd_kde.xsl (comment): Improved the template to use a simple xsl:if instead of xsl:choose. * xsl/cmd_kde.xsl: Added kde.desktop.header template (formerly: desktop.header template in xsl/cmd_common.xsl). (mime-type, glob): Improved glob template. Instead of xsl:for-each we now use a matching template, that outputs the pattern in alphabetical order. * xsl/cmd_website.xsl (mime-type, html.content.table.mime.head): Added some class attributes for CSS styling. 2007-01-15 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in (chemical/x-cactvs-ascii) (chemical/x-cactvs-binary, chemical/x-cactvs-table): Added acronym/expanded-acronym combination for CACTVS. (chemical/x-cerius): Ditto for MSI. (chemical/x-mdl-rxnfile): Ditto for 2D. (chemical/x-inchi, chemical/x-inchi-xml, chemical/x-ncbi-asn1): Re- ordered acronyms in alphabetical order. 2007-01-15 Daniel Leidert <daniel.leidert@wgdd.de> * html_docs/cmd.css: Added style pattern to have a fixed footer for the footnote(s). Reorganized the selectors in alphabetical order. * xsl/cmd_website.xsl (html.content): Added container around content and footer to allow introduced styling. (html.content.foot): The border is now realized via CSS. Improved space usage. 2007-01-14 Daniel Leidert <daniel.leidert@wgdd.de> * xsl/cmd_website.xsl (html.content.table.mime.head): Improved table header cell content. 2007-01-14 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in (specification): Added a resource attribute to comment a specification. * xsl/cmd_website.xsl: Added documentation to most templates. Reorganized the templates, renamed a lot of them and outsourced several parts to own templates. Added a new html.content.foot template for footnotes. (chemical-mime): Outsourced HTML content creation into new html.content template. (comment): Adjusted after changes to comment.acronym.check (ex: comment.acronym.replace) and comment.acronym.no.replace (ex: comment.acronym.no.replace). (glob, specification): Improved and shorter. (mime-type): Adjusted after renaming mime.type template. (specification): Added support for newly introduced resource attribute. (header.html): Renamed to html.content.head. (table.mime.supported): Renamed to html.content.table.mime.supported. (table.mime.unsupported): Renamed to html.content.table.mime.unsupported. (table.mime.header): Renamed to html.content.table.mime.head. Added alias and sub-class-of headers to table header cell. (comment.acronym.replace): Renamed to comment.acronym.check. Rewritten template - now it always checks the whole comment content for (expanded-)acronam matches and "adds" acronym tags to it's content instead of just giving the right-of-match content to the new template call. So we really check the whole comment content for matches. (comment.acronym.no.replace): Renamed to comment.acronym.output. Adjusted after changes to comment.acronym.check (ex: comment.acronym.replace). (mime.type): Renamed to mimetype.output. 2007-01-07 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in (chemical/x-msi-mdf): Fixed sub-class-of value. 2007-01-07 Daniel Leidert <daniel.leidert@wgdd.de> * html_docs/Makefile.am (htmldocsdir): Fixed bug. 2007-01-07 Daniel Leidert <daniel.leidert@wgdd.de> * xsl/cmd_website.xsl (mime.type): Moved processing of alias and sub-class-of into an own matching template. 2007-01-07 Daniel Leidert <daniel.leidert@wgdd.de> * html_docs/cmd.css: Added span.alias, span.mime-type and span.sub-class-of styling for the newly introduced fields at output. (td.mime-type): Removed in favour of span.mime-type. * src/chemical-mime-database.xml.in (chemical/x-inchi-xml): Fixed sub-class of value. * xsl/cmd_website.xsl (mime-type): Outsourced mime-type table cell creation to new mime.type template, which also adds support for sub-class-of and alias content. 2007-01-07 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in: Initially added application/x-xdrawchem without activating it. Set pattern priority for most MIME types (except conflicting ones) to 50 (default). (chemical/x-gaussian-input): Commented .com extension for the moment until we have magic pattern. (chemical/x-hin): Improved pattern. (chemical/x-pdb): Commented .ent extension as it conflicts with entitity definition files (and we don't want to open such files with chemical applications). 2007-01-07 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in (chemical/x-cmtx) (chemical/x-shelx): Fixed pattern (forgot to count the newline). 2007-01-07 Daniel Leidert <daniel.leidert@wgdd.de> * html_docs/cmd.css: Added a border between MIME types. Increased space to table cell borders. * src/chemical-mime-database.xml.in: Added (currently unsupported) chemical/x-cmdf, chemical/x-cmmf and chemical/x-cmtx MIME types. (chemical/x-cerius): Fixed description. (chemical/x-shelx): Improved pattern to not conflict with chemical/x-cmtx. * xsl/cmd_website.xsl (mime-type): Added a class attribute to the first tr tag, to allow a border. 2007-01-07 Daniel Leidert <daniel.leidert@wgdd.de> * NEWS: Prepared for release 0.1.94. * src/chemical-mime-database.xml.in (chemical/x-cache) (chemical/x-cache-csf): Added an acronym/expanded-acronym combination for the CAChe acronym. 2007-01-06 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in: Added chemical/x-cerius and chemical/x-ctx initially, but didn't activate it yet. (chemical/x-cml): Added some magic pattern. (chemical/x-genbank): Added acronym/expanded-acronym combination for GenBank abbreviation. (chemical/x-gulp-input, chemical/x-gulp): Improved wording. (chemical/x-msi-car): Removed .cor extension for the moment. Added magic patter and specification resources. (chemical/x-msi-hessian): Added .hessianx and .xhessian extensions. Added magic patter and specification resources. (chemical/x-msi-mdf): Fixed sub-class-of. Added magic pattern and specification resources. (chemical/x-msi-msi): Added magic patter and specification resources. (chemical/x-vmd): Added specification resource. 2007-01-06 Daniel Leidert <daniel.leidert@wgdd.de> * NEWS: Prepared for release 0.1.94. * TODO: Updated. 2007-01-06 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in (chemical/x-inchi) (chemical/x-inchi-xml): Added an acronym/expanded-acronym combination for IUPAC. * xsl/cmd_website.xsl (comment.acronym.replace): Added a routine to add an acronym /tag) directly behind a found expanded-acronym substring. Added a few comments to explain, what we do. 2007-01-06 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in: Added copyright notice. Added a comment for the root-XML element. (chemical/x-cactvs-ascii, chemical/x-ncbi-asn1) (chemical/x-ncbi-asn1-binary, chemical/x-ncbi-asn1-xml): Added some acronym/expanded-acronym combinations for ASCII, ASN.1 and XML acronyms. 2007-01-06 Daniel Leidert <daniel.leidert@wgdd.de> * Makefile.am: Updated copyright notice. (SUBDIRS): Added the html_docs directory, that contains the HTML (build) files. * configure.ac: Updated copyright notice. (AC_CONFIG_FILES): Added html_docs/Makefile and xsl/cmd_entities.dtd. * src/Makefile.am: Updated copyright notice. * src/chemical-mime-database.xml.in: Changed mime-type element definition bit, so that an acronym requires an expanded acronym element. Makes the life easier. Changed the attribute list default of the conflicts element, so that we have less work when writing this element. (chemical/x-genbank): Added pattern and specification found recently. (chemical/x-mol2, chemical/x-ncbi-asn1): Added some specification URLs I found. (chemical/x-gulp-input, chemical/x-mopac-input, chemical/x-msi-car): Changed conflicts element according to it's DTD change. * xsl/Makefile.am: Updated copyright notice. (EXTRA_DIST, DISTCLEANFILES): Added newly introduced files cmd_website.xsl and cmd_entities.dtd(.in). * xsl/cmd_common.xsl: Updated copyright notice. Changed exsl namespace prefix to exslt. Added missing newline at the end of the file. * xsl/cmd_freedesktop_org.xsl: Updated copyright notice. * xsl/cmd_gnome-keys.xsl: Ditto. Added missing newline at the end of the file. * xsl/cmd_gnome-mime.xsl: Ditto. * xsl/cmd_kde.xsl: Ditto. * xsl/cmd_website.xsl: * xsl/cmd_entities.dtd.in: * html_docs/Makefile.am: * html_docs/cmd.css: * html_docs/index.html: Added to create the HTML files of the project - the projects homepage and a large table with the information of the database. 2007-01-06 Daniel Leidert <daniel.leidert@wgdd.de> * freedesktop.org/Makefile.am: Updated copyright notice. (freedesktopmimedir): Changed to use the variable directly. (install-data-hook, uninstall-hook): Fixed update-mime-database command line. Thanks to Jean Bréfort for reporting this issue. * kde/Makefile.am: Updated copyright notice. (kdemimedir): Changed to use the variable directly. * gnome/Makefile.am: Ditto. (gnomemimedir): Ditto. * icons/pixmaps/Makefile.am: Ditto. (pixmapsdir): Ditto. * icons/hicolor/Makefile.am: Ditto. (hicolorthemedir, install-data-local, uninstall-hook): Ditto. 2007-01-05 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in (chemical/x-gamess-output): Fixed magic pattern. Now all test files work. (chemical/x-gaussian-log): Just added a comment about the limitation of this pattern. 2007-01-05 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in(chemical/x-gamess-output) (chemical/x-gaussian-log): Removed the .log extension that leads to a conflict with the text/x-log MIME type. 2007-01-03 Daniel Leidert <daniel.leidert@wgdd.de> * README: Updated copyright. 2007-01-03 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in: Added an entry as test case for pattern detection rules. 2007-01-03 Daniel Leidert <daniel.leidert@wgdd.de> * AUTHORS: Added some alternative mail addresses. * ChangeLog: Fixed my mail address. * po/ChangeLog: Ditto. * src/chemical-mime-database.xml.in: Cosmetic fix for ID. 2007-01-03 Daniel Leidert <daniel.leidert@wgdd.de> * NEWS: Prepared for release 0.1.94. 2007-01-03 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in: Removed the obsolete comments. (mime-type): Fixed DTD. The freedesktop.org mime-info doctype allows more than one root-XML element. Added currently not activated chemical/x-cache-csf, chemical/x-macromodel-output, chemical/x-qchem-input and chemical/x-qchem-output. Added chemical/x-gamess-output and chemical/x-ncbi-asn1-xml. Cosmetic changes. (chemical/x-cactvs-ascii): Improved magic pattern. Thanks to Wolf-D. Ihlenfeldt. (chemical/x-cdx): Improved magic pattern by adding a second defined 16 Byte search string. (chemical/x-cml): Added CML1 namespace. (chemical/x-dmol): Added missing .dmol extension. (chemical/x-gamess-input): Removed .gam extension (belongs to chemical/x-gamess-output MIME type). Added magic pattern. (chemical/x-gaussian-input): Added .com extension (found at OpenBabel). Fixed specification URL. (chemical/x-gaussian-log): Added missing .gxx and .log extensions. Added rarely used MIME type aliases. Added a common magic string. Added specification URL. (chemical/x-gulp): Found one more extension. Currently not activated, because of unknown usage. (chemical/x-hin): Added missing magic priority. (chemical/x-mol2): Added magic pattern. (chemical/x-pdb): Added missing .ent extension. (chemical/x-shelx): Added missing .ins extension. Added magic pattern. 2007-01-02 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in: Cosmetic changes. 2007-01-02 Daniel Leidert <daniel.leidert@wgdd.de> * NEWS: Prepared for release 0.1.94. * src/chemical-mime-database.xml.in (chemical/x-mdl-sdfile): Added conflicts element for application/vnd.stardivision.math MIME type. (chemical/x-mopac-input): Added conflicts for audio/x-musepack and video/mpeg MIME types. (chemical/x-msi-car): Added conflicts for application/x-arc MIME type. 2007-01-02 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in (chemical/x-cactvs-ascii): Support activated. Magic pattern fixed. 2007-01-01 Daniel Leidert <daniel.leidert@wgdd.de> * THANKS: Updated. 2007-01-01 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in: Added chemical/x-cactvs-ascii, chemical/x-cactvs-binary and chemical/x-cactvs-table MIME types. Thanks to Wolf-D. Ihlenfeldt. Added CACTVS applications that support our MIME types (based on http://www2.chemie.uni-erlangen.de/software/cactvs/mime.html). Small cleanups to the database. (chemical/x-ncbi-asn1-binary): Fixed the magic pattern. But I fear, it's still not perfect. 2006-12-30 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in: Made all acronym and expanded-acronym elements untranslatable. The acronyms used here are only hardly translatable, so we let it be. (chemical/x-cdx, chemical/x-cdxml): Improved MIME type description. 2006-12-30 Daniel Leidert <daniel.leidert@wgdd.de> * autogen.sh: Fixed a typo. (AUTOMAKE_FILES): Define list depending on the automake version. * configure.ac: Fixed description of `--with-pixmaps' option. Replaced `--with-gnome-theme' with the more appropriate `--with-hicolor-theme' option. The latter also changed all relevant variables. Further removed the `--with-kde-theme' option. This option is obsolete with these changes. (AM_INIT_AUTOMAKE): Fixed macro usage. Providing AC_PACKAGE_ variables to this macro is obsolete. (KDE_CONFIG, with_kde_mime): Improved path search by using `kde-config'. (BOOL_*): Fixed/improved boolean variables. (AC_CONFIG_FILES): Removed icons/crystalsvg/Makefile, that was removed. * icons/hicolor/Makefile.am: * icons/pixmaps/Makefile.am: Changed theme related variables accordingly to the changes in configure.ac. * icons/Makefile.am (SUBDIRS): * icons/crystalsvg/Makefile.am: * icons/crystalsvg/chemistry.svg: * icons/pixmaps/Makefile.am (pixmaps_list): * icons/pixmaps/chemistry.png: The crystalsvg directory was completely removed from the package. Instead only the desktop-neutral places for theme and on-theme icons are used. So a raster image for the KDE 3 .desktop files is installed into non-theme icons for the moment. * src/chemical-mime-database.xml.in: Fixed an issue in the mime-type element definition. sub-class-of may not appear. Added chemical/x-cdxml, chemical/x-ncbi-asn1 and chemical/x-ncbi-asn1-binary. (chemical/x-cdx): Added magic pattern based on the format description at cambridgesoft.com. (chemical/x-cif): Added magic pattern based on the CIF 1.1 format specification. 2006-12-15 Daniel Leidert <daniel.leidert@wgdd.de> * autogen.sh: Removed automake version check and added it to Makefile.am. * Makefile.am (AUTOMAKE_OPTIONS): Added automake version check. 2006-09-05 Daniel Leidert <daniel.leidert@wgdd.de> * autogen.sh: Many updates for a better usability. * configure.ac: Replaced `echo' calls with the related `AC_MSG_*' macros. Fixed usage of `AC_ARG_*' macros. (ENABLE_UPDATEDB, ENABLE_CONVERT, DIR_FDMIME, DIR_GNOMEMIME) (DIR_PIXMAPS, DIR_GNOMETHEME, DIR_KDEMIME, DIR_KDETHEME): Replaced custom variables with it's automatically assigned equivalent variables `enable_*' and `with_*'. Alle relevant tests have been adjusted. (CONVERT, RSVG, UPDATE_MIME_DATABASE): Changed the return value if determination failed to `no'. All relevant tests have been adjusted. * freedesktop.org/Makefile.am (fdomimedir, fdomime_DATA, CLEANFILES): Renamed fdomime{dir,_DATA} to freedesktopmime{dir,_DATA}. (freedesktopmimedir): Changed the variable name, that holds the installation path (see configure.ac changes). (install-data-hook, uninstall-hook): Ditto. * gnome/Makefile.am (gnomemimedir): Ditto. * icons/crystalsvg/Makefile.am (kdethemedir, install-data-local) (uninstall-hook): Ditto. * icons/hicolor/Makefile.am (gnomethemedir, install-data-local) (uninstall-hook): Ditto. * icons/pixmaps/Makefile.am (pixmapsdir): Ditto. * kde/Makefile.am (kdemimedir): Ditto. * src/chemical-mime-database.xml.in: Added chemical/x-gulp support. Added chemical/x-gulp-input, which is not completely supported yet. * xsl/cmd_freedesktop_org.xsl: Added missing newline at the end of the file. (mime-type): Cosmetic fix. * README: Typo fixed. 2006-06-15 Daniel Leidert <daniel.leidert@wgdd.de> * ABOUT-NLS: Removed. 2006-06-15 Daniel Leidert <daniel.leidert@wgdd.de> * configure.ac: Fixed usage of AM_PO_SUBDIRS. It is necessary in every case to create po/Makefile. 2006-06-15 Daniel Leidert <daniel.leidert@wgdd.de> * Makefile.am (AUTOMAKE_OPTIONS): Added check-news option. (MAINTAINERCLEANFILES): Removing .md5 sums too. Using a shorter expression for the archives. (DISTCHECK_CONFIGURE_FLAGS): Added the --disable-nls option. * NEWS: Added an entry for the post release version bump to version 0.1.94 to fit new check-news option. * configure.ac: intltool fixed several issues in the latest 0.35.0 release. Now it uses AM_PO_SUBDIRS instead of AM_GNU_GETTEXT([..]) (http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=365727). Some more changes added because of intltools latest release. Added the AC_CONFIG_SRCDIR macro. * freedesktop.org/Makefile.am (install-data-hook) (uninstall-hook): Fixed the path expression, so 'make install' no longer fails in the special case of using the DESTDIR variable as user without the rights to write to $datadir/mime. * po/Makevars: Added MSGID_BUGS_ADDRESS variable. * xsl/cmd_common.xsl: Just a few cosmetic fixes for the formatting. 2006-05-19 Daniel Leidert <daniel.leidert@wgdd.de> * configure.ac (AC_PACKAGE_VERSION): Post-release version bump to 0.1.94. * Makefile.am (MAINTAINERCLEANFILES): Just a cosmetic change (more general expression). 2006-05-19 Daniel Leidert <daniel.leidert@wgdd.de> * NEWS: Released version 0.1.93. * chemical-mime-data.pc.in (Requires): Small fix for a better output. * configure.ac (CHEMICAL_MIME_DEPS): Ditto. * src/chemical-mime-database.xml.in: Added comments to show up in gettext's po files. Added InChI and JCAMP acronym. 2006-05-19 Daniel Leidert <daniel.leidert@wgdd.de> * Fixed CVS repository content to get the state before sf.net CVS service crashed. 2006-05-09 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in (chemical/x-genbank): Added missing conflicts information. 2006-05-08 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in: Added more comments to the DTD for a better description of their usage. 2006-05-08 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in: Removing useless spaces and tabs at line-ends. (chemical/x-genbank): Fixed an invalidity, which clashes with the DTD. 2006-05-08 Daniel Leidert <daniel.leidert@wgdd.de> * TODO: Removed stuff done by Jerome. * ChangeLog: Added missing entry for Jeromes last commit. 2006-05-08 Jerome Pansanel <j.pansanel@pansanel.net> * configure.ac (ALL_LINGUAS): Re-Added French to available translations. * src/chemical-mime-database.xml.in: Added chemical/x-genbank, chemical/x-inchi, chemical/x-inchi-xml, chemical/x-jcamp-dx, chemical/x-shelx, chemical/x-vmd MIME types (kfile_chemical support). (chemical/x-daylight-smiles): Added one missing pattern. (chemical/x-dmol, chemical/x-mol2): Fixed a typo in the comment. 2006-05-08 Daniel Leidert <daniel.leidert@wgdd.de> * TODO: Added note about KDE and GNOME MIME magic databases. 2006-05-06 Daniel Leidert <daniel.leidert@wgdd.de> * src/Makefile.am (check-local): Added XMLLINT_FLAGS to command. 2006-05-06 Daniel Leidert <daniel.leidert@wgdd.de> * freedesktop.org/Makefile.am (chemical-mime-data.xml): Added cmd_common.xsl to prerequisites and fixed rule. * gnome/Makefile.am (chemical-mime-data.keys) (chemical-mime-data.mime): Ditto. * kde/Makefile.am (*.desktop): Ditto. 2006-05-06 Daniel Leidert <daniel.leidert@wgdd.de> * TODO: Just added a note about viewmol. * configure.ac (AM_GNU_GETTEXT, CATOBJEXT): Work around a bug in gettext.m4 leading to non-updateable translations. * xsl/cmd_kde.xsl (pattern.list): Fixed the wrong field name. 2006-05-03 Daniel Leidert <daniel.leidert@wgdd.de> * HACKING: Added. * Makefile.am (EXTRA_DIST): Ditto. * TODO: Improved overview and structure. * src/chemical-mime-database.xml.in: Changed DTD for application element and adjusted the usage of this element in the whole file. 2006-05-03 Daniel Leidert <daniel.leidert@wgdd.de> * xsl/cmd_freedesktop_org.xsl: Use the namespace attribute, not the xmlns attribute, for xsl:element (makes no real difference, but it is IMHO more common). 2006-05-03 Daniel Leidert <daniel.leidert@wgdd.de> * TODO: Added information pointer to gdis manual. * src/chemical-mime-database.xml.in: Added gdis application elements. (chemical/x-mopac-out): Added magic pattern and "*.out" pattern. 2006-05-03 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in (chemical/x-cif) (chemical/x-mmcif): Fixed acronym explanation for 'CIF'. Changed Comment. (chemical/x-mdl-molfile, chemical/x-mdl-rdfile, chemical/x-mdl-rxnfile) (chemical/x-mdl-sdfile, chemical/x-mdl-tgf): Added acronym and explanation for 'MDL'. 2006-05-03 Daniel Leidert <daniel.leidert@wgdd.de> * NEWS: Added items for next version 0.1.93. * src/chemical-mime-database.xml.in: Small DTD change to support a package attribute for the application element. Added support for chemical/x-gamess-input and chemical/x-mopac-out. Added application elements for xdrawchem and molden, where I missed them before, and initially added the application elements for gchem3d-viewer. * xsl/cmd_freedesktop_org.xsl: Better use the <xsl:element> element instead of the element to print. 2006-05-02 Daniel Leidert <daniel.leidert@wgdd.de> * acinclude.m4: Added MP_PROG_XMLLINT macro to make xmllint available for 'check' target. * configure.ac: Ditto. * src/Makefile.am: Added check target to make sure, that the resulting database follows our own document declaration. 2006-05-02 Daniel Leidert <daniel.leidert@wgdd.de> * xsl/cmd_kde.xsl: Fixed header. 2006-05-02 Daniel Leidert <daniel.leidert@wgdd.de> * NEWS: Fixed typo. Added a new entry for the next release. 2006-05-02 Daniel Leidert <daniel.leidert@wgdd.de> * configure.ac (AC_PACKAGE_VERSION): Post-release version bump to 0.1.93. * Makefile.am (EXTRA_DIST): Fixed a bug. The resulting .pc file should not be shipped with the 'dist' target. 2006-05-02 Daniel Leidert <daniel.leidert@wgdd.de> * configure.ac: Bump to version 0.1.92. * NEWS: Ditto. 2006-05-02 Daniel Leidert <daniel.leidert@wgdd.de> * NEWS: Added information about latest release. 2006-05-02 Daniel Leidert <daniel.leidert@wgdd.de> * TODO: Fixed content. A lot of notes were removed, because I already solved them. 2006-05-02 Daniel Leidert <daniel.leidert@wgdd.de> * Makefile.am (MAINTAINERCLEANFILES): Added archives created by 'dist' target to 'maintainer-clean' target. * configure.ac (AC_PACKAGE_VERSION): Increased version 0.1.91. First RC. * src/chemical-mime-database.xml.in: Added almost all MIME types, which are used by jmol, gchempaint, pymol, rasmol, viewmol, xdrawchem (except the x-turbomole* MIME types used by viewmol). Fixed DTD. Removed comments. * xsl/cmd_freedesktop_org.xsl (mime-type): Added information, since when the MIME type is supported. * xsl/cmd_gnome-keys.xsl (icon): Fixed a bug. Icon name was missing. * xsl/cmd_kde.xsl (icon): Ditto. Further fixed the substring-after() usage. * xsl/cmd_gnome-mime.xsl (icon): Ditto. 2006-05-02 Daniel Leidert <daniel.leidert@wgdd.de> * freedesktop.org/Makefile.am: Fixed vpath directive to get the right location for chemical-mime-database.xml. Fixes 'make distcheck' error. * gnome/Makefile.am: Ditto. * kde/Makefile.am: Ditto. * xsl/Makefile.am (EXTRA_DIST): Added missing cmd_kde.xsl stylesheet. Fixes 'make distcheck' error. 2006-05-02 Daniel Leidert <daniel.leidert@wgdd.de> * Makefile.am (SUBDIRS): Re-added kde directory. * README: Adjusted info-set. * THANKS: Added. * src/chemical-mime-database.xml.in: Fixed formatting issues and changed element name for chemical-mime-type to mime-type as used by fd.o. Added chemical/x-gamess-input for testing. * xsl/cmd_common.xsl: Fixed header. (write.chunk): Removed standalone and added media-type parameter. (header.desktop): Added template to generate the header part of KDE's .desktop files. (header.xml): Fixed. Use xsl:comment instead of xsl:text. * xsl/cmd_freedesktop_org.xsl: Fixed header and several parameters. (chemical-mime-type, mime-type): Fixed template to fit changes in src/chemical-mime-database.xml.in. (acronym|alias|comment|expanded-acronym|glob|magic|match|root-XML) (sub-class-of): Small changes. * xsl/cmd_gnome-keys.xsl: Ditto. (chemical-mime-type, mime-type): Ditto. * xsl/cmd_gnome-mime.xsl: Ditto. (chemical-mime-type, mime-type): Ditto. * xsl/cmd_kde.xsl: Added stylesheet for KDE's .desktop files. * kde/*.desktop.in: Removed (replaced by new flat database). 2006-04-30 Daniel Leidert <daniel.leidert@wgdd.de> * configure.ac (AC_PACKAGE_VERSION): Bump version to 0.1.99 to show, where we want to go. * src/chemical-mime-database.xml.in: Fixed just a few formatting issues. 2006-04-30 Daniel Leidert <daniel.leidert@wgdd.de> * src/chemical-mime-database.xml.in: Added new flat database. * Makefile.am (SUBDIRS): Added new directories. * TODO: Moved information to the new flat database. Added a few points which are related to our latest change to a flat database file. * acinclude.m4: Added to provide a macro to get the location of xsltproc (and possible options to use). * configure.ac: Added new template to get xsltproc. (ALL_LINGUAS): Removed nl and fr for the moment (changes are too heavy, so the files need a complete update). (AC_CONFIG_FILES): Added new directories and Makefiles. * freedesktop.org/Makefile.am: Fixed to fit new flat database. * gnome/Makefile.am: Ditto. * kde/Makefile.am: Ditto. * freedesktop.org/chemical-mime-data.xml.in: Removed (replaced by new flat database). * gnome/chemical-mime-data.keys.in: Ditto. * gnome/chemical-mime-data.mime: Ditto. * src/Makefile.am: Added. * xsl/Makefile.am: Ditto. * xsl/cmd_common.xsl: Ditto. * xsl/cmd_freedesktop_org.xsl: Ditto. * xsl/cmd_gnome-keys.xsl: Ditto. * xsl/cmd_gnome-mime.xsl: Ditto. 2006-02-18 Daniel Leidert <daniel.leidert@wgdd.de> * configure.ac (IT_PROG_INTLTOOL): Call the AM_GNU_GETTEXT macro from the gettext suite instead of calling GTK's AM_GLIB_GNU_GETTEXT. Turn USE_NLS to 'no' to avoid installation of catalog files. * ABOUT-NLS: Added for AM_GNU_GETTEXT to be satisfied. * freedesktop.org/Makefile.am (BOOL_FREEDESKTOP_MIME_TRUE): Minor cleanup. * gnome/Makefile.am (BOOL_GNOME_MIME_TRUE): Ditto. * kde/Makefile.am (BOOL_KDE_MIME_TRUE): Ditto. 2006-02-17 Daniel Leidert <daniel.leidert@wgdd.de> * Makefile.am (MAINTAINERCLEANFILES): Added config.{sub,guess} which may be linked/copied by automake. * configure.ac (PACKAGE_BUGREPORT): Fixed project and bug-tracker URL. (AC_PROG_INTLTOOL, IT_PROG_INTLTOOL): AC_PROG_INTLTOOL is obsolete. (CATALOGS): Fixed value to avoid installation of cataloges, which are useless for us. 2006-02-17 Daniel Leidert <daniel.leidert@wgdd.de> * freedesktop.org/Makefile.am: Fixed missing file after 'make dist' issue caused by condition construct. * gnome/Makefile.am: Ditto. * icons/pixmaps/Makefile.am: Ditto. * kde/Makefile.am: Ditto. * icons/crystalsvg/Makefile.am: Cleaned. * icons/hicolor/Makefile.am: Ditto. 2006-02-17 Daniel Leidert <daniel.leidert@wgdd.de> * icons/crystalsvg/Makefile.am (EXTRA_DIST, ICONS, SIZES) (icon_sources, icon_sizes, all-local, all-icons) (install-data-local, uninstall-hook): Make it much more deterministic and simple. * icons/hicolor/Makefile.am (EXTRA_DIST, ICONS, SIZES) (icon_sources, icon_sizes, all-local, all-icons) (install-data-local, uninstall-hook): Ditto. 2006-02-17 Daniel Leidert <daniel.leidert@wgdd.de> * AUTHORS: Updated project authors information. * COPYING: Updated FSF address. * README: Ditto. Updated license and copyright information. * autogen.sh: Added license and file information. * Makefile.am: Added license and file information. (EXTRA_DIST): Remove automatically included files. (pkgconfig_DATA): Install pkgconfig file in every case. * chemical-mime-data.pc.in (Description, URL): Added project URL. Fixed description. * configure.ac: Added license and file information. Removed everything, which is put to config.h (we do not need it). Fixed option descriptions. Fixed result output. Fixed markup issues. (UPDATE_MIME_DATABASE): Added possibility for custom definition. * freedesktop.org/Makefile.am: Added license and file information. Reordered. Added information to if-endif constructs. * gnome/Makefile.am: Ditto. * icons/Makefile.am: Ditto. * icons/crystalsvg/Makefile.am: Ditto. * icons/hicolor/Makefile.am: Ditto. * icons/pixmaps/Makefile.am: Ditto. * kde/Makefile.am: Ditto. * freedesktop.org/chemical-mime-data.xml.in: Updated FSF address. (chemical/x-cerius, chemical/x-chemdraw, chemical/x-daylight-smiles) (chemical/x-genbank, chemical/x-mif): Commented out all MIME types which cause a conflict with well known MIME types. * gnome/chemical-mime-data.keys.in: Updated FSF address. * gnome/chemical-mime-data.mime: Updated FSF address. * po/POTFILES.in: Fixed alphabetical order. 2006-02-13 Daniel Leidert <daniel.leidert@wgdd.de> * po/POTFILES.in: Fixed a minor bug. 2006-02-13 Daniel Leidert <daniel.leidert@wgdd.de> * configure.ac (CONVERT, RSVG): Move the stuff related to rsvg and convert detection to a better place. * icons/crystalsvg/Makefile.am (all-icons): Adjust the test for RSVG after changing configure.ac. * icons/hicolor/Makefile.am (all-icons): Ditto. 2006-02-13 Daniel Leidert <daniel.leidert@wgdd.de> * configure.ac: Fix all AC_SUBST() macro calls. (RSVG, CONVERT): Add possibility for custom definition where to find the rsvg or convert utility (may help if they are not in PATH). 2006-02-13 Daniel Leidert <daniel.leidert@wgdd.de> * Move all files back to sourceforge.net. Fixed all CVS headers, because sf.net does not know LocalKeyword nor tag. Removed docs/ and examples/, because they should not be part of the source. See the ChangeLog for all changes in the past. 2006-01-29 Daniel Leidert <daniel.leidert@wgdd.de> * Makefile.am (MAINTAINERCLEANFILES): The maintainer-clean target should clean the source for CVS works. So everything produced with autogen.sh is removed with this target. * gnome/Makefile.am (MAINTAINERCLEANFILES): Ditto. * icons/Makefile.am (MAINTAINERCLEANFILES): Ditto. * icons/crystalsvg/Makefile.am (MAINTAINERCLEANFILES): Ditto. * icons/hicolor/Makefile.am (MAINTAINERCLEANFILES): Ditto. * icons/pixmaps/Makefile.am (MAINTAINERCLEANFILES): Ditto. * freedesktop.org/Makefile.am (MAINTAINERCLEANFILES): Ditto. (CLEANFILES): Use variable. * kde/Makefile.am (MAINTAINERCLEANFILES): Ditto. (CLEANFILES): Ditto. * autogen.sh: Add -c|--copy options to allow to choose between linking and copying the files. 2006-01-27 Daniel Leidert <daniel.leidert@wgdd.de> * configure.ac (PKG_CONFIG, PKG_PROG_PKG_CONFIG): Call the PKG_PROG_PKG_CONFIG macro to determine PKG_CONFIG. (PKG_CHECK_EXISTS): Determine the existance of shared-mime-info and gnome-mime-data-2.0 via PKG_CHECK_EXISTS macro. (BOOL_UPDATE_DATABASE): Fixed a bug when the fd.o shared-mime-info stuff should not be installed. * freedesktop.org/chemical-mime-data.xml.in: Began to fix the db stuff, whichcurrently prevents the package from working with GNOM 2.12 and above. * kde/seq-aa-fasta.desktop.in: Bug (typo) fix. Reordering content. * kde/seq-aa-genpept.desktop.in: Ditto. * kde/seq-na-fasta.desktop.in: Ditto. * kde/seq-na-genbank.desktop.in: Ditto. * kde/x-alchemy.desktop.in: Ditto. * kde/x-cache-csf.desktop.in: Ditto. * kde/x-cache.desktop.in: Ditto. * kde/x-cactvs-ascii.desktop.in: Ditto. * kde/x-cactvs-binary.desktop.in: Ditto. * kde/x-cactvs-table.desktop.in: Ditto. * kde/x-cdx.desktop.in: Ditto. * kde/x-cerius.desktop.in: Ditto. * kde/x-chem3d.desktop.in: Ditto. * kde/x-chemdraw.desktop.in: Ditto. * kde/x-cif.desktop.in: Ditto. * kde/x-cmdf.desktop.in: Ditto. * kde/x-cml.desktop.in: Ditto. * kde/x-compass.desktop.in: Ditto. * kde/x-crossfire.desktop.in: Ditto. * kde/x-csml.desktop.in: Ditto. * kde/x-ctx.desktop.in: Ditto. * kde/x-cxf.desktop.in: Ditto. * kde/x-daylight-smiles.desktop.in: Ditto. * kde/x-embl-dl-nucleotide.desktop.in: Ditto. * kde/x-fasta.desktop.in: Ditto. * kde/x-galactic-spc.desktop.in: Ditto. * kde/x-gamess-input.desktop.in: Ditto. * kde/x-gaussian-checkpoint.desktop.in: Ditto. * kde/x-gaussian-cube.desktop.in: Ditto. * kde/x-gaussian-input.desktop.in: Ditto. * kde/x-gaussian-log.desktop.in: Ditto. * kde/x-gcg8-sequence.desktop.in: Ditto. * kde/x-genbank.desktop.in: Ditto. * kde/x-hin.desktop.in: Ditto. * kde/x-isostart.desktop.in: Ditto. * kde/x-jcamp-dx.desktop.in: Ditto. * kde/x-kinemage.desktop.in: Ditto. * kde/x-macmolecule.desktop.in: Ditto. * kde/x-macromodel-input.desktop.in: Ditto. * kde/x-mdl-molfile.desktop.in: Ditto. * kde/x-mdl-rdfile.desktop.in: Ditto. * kde/x-mdl-rxnfile.desktop.in: Ditto. * kde/x-mdl-sdfile.desktop.in: Ditto. * kde/x-mdl-tgf.desktop.in: Ditto. * kde/x-mif.desktop.in: Ditto. * kde/x-mmcif.desktop.in: Ditto. * kde/x-mol2.desktop.in: Ditto. * kde/x-molconn-Z.desktop.in: Ditto. * kde/x-mopac-graph.desktop.in: Ditto. * kde/x-mopac-input.desktop.in: Ditto. * kde/x-mopac-out.desktop.in: Ditto. * kde/x-mopac-vib.desktop.in: Ditto. * kde/x-ncbi-asn1-ascii.desktop.in: Ditto. * kde/x-ncbi-asn1-binary.desktop.in: Ditto. * kde/x-ncbi-asn1-spec.desktop.in: Ditto. * kde/x-pdb.desktop.in: Ditto. * kde/x-rosdal.desktop.in: Ditto. * kde/x-swissprot.desktop.in: Ditto. * kde/x-vamas-iso14976.desktop.in: Ditto. * kde/x-vmd.desktop.in: Ditto. * kde/x-xtel.desktop.in: Ditto. * kde/x-xyz.desktop.in: Ditto. * kde/x-cactvs-table.desktop.in: The only without the bug :(. Only reordering content here. 2006-01-13 Daniel Leidert <daniel.leidert@wgdd.de> * TODO: Add some important notes. * docs/README: Add a few resources and restructure. 2006-01-02 Daniel Leidert <daniel.leidert@wgdd.de> * ChangeLog: Changed used CVS keyword to a local one. More useful summary. * AUTHORS: Ditto. * NEWS: Ditto. * TODO: Ditto. * autogen.sh: Ditto. * docs/APPLIST: Ditto. * docs/README: Ditto. * examples/README: Ditto. * README: Ditto. Fixed copyright info. * freedesktop.org/chemical-mime-data.xml.in: Ditto. * gnome/chemical-mime-data.keys.in: Ditto. * gnome/chemical-mime-data.mime: Ditto. 2005-11-15 Daniel Leidert <daniel.leidert@wgdd.de> * autogen.sh (autotools): Remove autoheader. * configure.ac (dnl initialisation): Remove useless (auto)header stuff. * ChangeLog: Fixed syntax. 2005-10-05 Daniel Leidert <daniel.leidert@wgdd.de> * freedesktop.org/Makefile.am: Run update-mime-database at the right place $(DIR-FDMIME). 2005-09-19 Daniel Leidert <daniel.leidert@wgdd.de> * configure.ac: Added French to ALL_LINGUAS (thanks to Jean Bréfort). 2005-09-19 Daniel Leidert <daniel.leidert@wgdd.de> * autogen.sh: Manually link to automake scripts, if running automake does not copy/link the scripts. * configure.ac: Fixed a bug found by Jean, which leads to a unsatisfiable Requires: entry in chemical-mime-data.pc. 2005-08-22 Daniel Leidert <daniel.leidert@wgdd.de> * configure.ac, Makefile.am: Do not run update-mime-database for distcheck target but run it as default during normal installation. * configure.ac: Added option to choose the application to convert the verctor graphics and fix the decision-condition. * icons/crystalsvg/Makefile.am: Ditto. * icons/hicolor/Makefile.am: Ditto. 2005-06-30 Daniel Leidert <daniel.leidert@wgdd.de> * examples/README: Added some infos. 2005-06-30 Daniel Leidert <daniel.leidert@wgdd.de> * AUTHORS: Removed obsolete "DocumentId" string. * ChangeLog: Ditto. * NEWS: Ditto. * README: Ditto. * TODO: Ditto. * autogen.sh: Ditto. * docs/APPLIST: Ditto. * docs/README: Ditto. * freedesktop.org/chemical-mime-data.xml.in: Ditto. * gnome/chemical-mime-data.keys.in: Ditto. * gnome/chemical-mime-data.mime: Ditto. * ChangeLog: Fixed syntax. 2005-06-15 Daniel Leidert <daniel.leidert@wgdd.de> * Makefile.am: Fixed EXTRA_DIST. 2005-06-14 Daniel Leidert <daniel.leidert@wgdd.de> * COPYING: Moved whole package to GNU LGPL v.2.1. * NEWS: Ditto. * README: Ditto. * debian/copyright: Ditto. * freedesktop.org/chemical-mime-data.xml.in: Ditto. * gnome/chemical-mime-data.keys.in: Ditto. * gnome/chemical-mime-data.mime: Ditto. * LICENSE: Removed. COPYING is enough. 2005-06-14 Daniel Leidert <daniel.leidert@wgdd.de> * INSTALL: Readded readded with generic instructions. * AUTHORS: Added some infos. Fixed format issues. * COPYING: Ditto. * NEWS: Ditto. * README: Ditto. * TODO: Ditto. 2005-06-14 Daniel Leidert <daniel.leidert@wgdd.de> * Makefile.am: Added AUTOMAKE_OPTIONS. * configure.ac: Remove AUTOMAKE_OPTIONS (dist-bzip2). * INSTALL: Removed temporarily. 2005-05-09 Daniel Leidert <daniel.leidert@wgdd.de> * TODO: Fix typo. Added naming scheme note to release list. 2005-05-09 Daniel Leidert <daniel.leidert@wgdd.de> * Makefile.am: Commented out disableuninstallcheck. Reordered some parts. 2005-05-09 Daniel Leidert <daniel.leidert@wgdd.de> * INSTALL: Fixed typo. * NEWS: Added some more notes about done stuff. * chemical-mime-data.pc.in: Fixed description. 2005-05-09 Daniel Leidert <daniel.leidert@wgdd.de> * COPYING: Updated copyright information. 2005-05-09 Daniel Leidert <daniel.leidert@wgdd.de> * gnome/chemical-mime-data.keys.in: Fix a format bug. 2005-05-09 Daniel Leidert <daniel.leidert@wgdd.de> * configure.ac: Merged informational output. 2005-05-07 Daniel Leidert <daniel.leidert@wgdd.de> * kde/Makefile.am: Fix a bug (obsolete file mentioned). * freedesktop.org/chemical-mime-data.xml.in: Added a bit more info to the header. * gnome/chemical-mime-data.keys.in: Ditto. * gnome/chemical-mime-data.mime: Ditto. 2005-05-06 Daniel Leidert <daniel.leidert@wgdd.de> * freedesktop.org/chemical-mime-data.xml.in: Added license information to top of the file. Changed order of type and value. Set back a lot of comments for now. * gnome/chemical-mime-data.keys.in: Added missing types. Changed some descriptions. Added license information to top of the file. * gnome/chemical-mime-data.mime: Added missing MIME types. Commented out conflicting ones. Added license information to top of the file. * kde/Makefile.am: Added missing files. Fixed a build issue. * kde/seq-aa-genpept.desktop.in: Fixed comment and added missing pattern. * kde/seq-na-genbank.desktop.in: Ditto. * kde/x-mdl-rdfile.desktop: Ditto. * kde/x-mif.desktop.in: Ditto. * kde/x-pdb.desktop.in: Ditto. * kde/x-rosdal.desktop.in: Ditto. * kde/x-vamas-iso14976.desktop.in: Ditto. * kde/seq-aa-fasta.desktop.in: Ditto. * kde/seq-na-fasta.desktop.in: Ditto. * kde/x-fasta.desktop.in: Ditto. * kde/x-ncbi-asn1-ascii.desktop.in: Ditto. * kde/x-ncbi-asn1-spec.desktop.in: Ditto. * kde/x-ncbi-asn1.desktop.in: Removed. * kde/x-ppd.desktop.in: Removed. 2005-05-05 Daniel Leidert <daniel.leidert@wgdd.de> * AUTHORS: Updated information. * INSTALL: Ditto. * README: Ditto. * NEWS: Ditto. * TODO: Ditto. * autogen.sh: Remove --force option to prevent overwriting INSTALL. * debian/changelog: Changed from native to non-native package revision. * debian/control: Updated depends (removed all autoconf/automake depends). * debian/rules: Remove all lines running autoconf/automake parts. 2005-05-05 Daniel Leidert <daniel.leidert@wgdd.de> * configure.ac: Added more checks and try to solve possible "impossible" situations. Added a bit more output, what will be done and changed some general output. 2005-05-05 Daniel Leidert <daniel.leidert@wgdd.de> * configure.ac: Worked on a better structure. Readded possibility to change path directions, but use $datadir as default. Added a bit more useful output. Added checks for shared-mime-info and gnome-mime-data. * freedesktop.org/Makefile.am: Fixed installation path determination (determined during configure, see above). * gnome/Makefile.am: Ditto. * icons/crystalsvg/Makefile.am: Ditto. * icons/hicolor/Makefile.am: Ditto. * icons/pixmaps/Makefile.am: Ditto. * kde/Makefile.am: Ditto. * TODO: Refined todo list and removed done parts. 2005-05-03 Daniel Leidert <daniel.leidert@wgdd.de> * configure.ac: Remove leading space in $CHEMICAL_MIME_DEPS. Added a bit more info if pkgconfig cannot detect packages. * chemical-mime-data.pc.in: Fixed description. Added empty 'Libs:' and 'Cflags' fields. * TODO: Some clean up. * examples/README: Added basic structure for additional testing. Added additional infos. * docs/mime-data-specification.txt: Added additional infos. * docs/mime-descriptions-guidelines: Ditto. * docs/README: Ditto. * docs/APPLIST: Ditto. 2005-05-02 Daniel Leidert <daniel.leidert@wgdd.de> * TODO: Added note about conflicting types. * freedesktop.org/chemical-mime-data.xml.in: Ditto. * Makefile.am: Fixed clean/distclean target. Added workaround for distcheck target. * chemical-mime-data.pc.in: Added dependencies. Added correct information during parse process. * configure.ac: Fixed a possible error situation (update-mime-database). Added a bit more useful output. Added dependency collection and dist-bzip2 target. Option update-database is turned off by default. * icons/hicolor/Makefile.am: More work on flexibility. * icons/crystalsvg/Makefile.am: Ditto. * debian/control: Fixed Depends/Suggests/Replaces. * debian/rules: Add a fix for an autoconf-bug, several targets and .PHONY (the real solution for 2005-03-03 change). 2005-05-01 Daniel Leidert <daniel.leidert@wgdd.de> * Too much changes to point out every file change: Complete rework of theme-icon installation. Removed all raster images (they are now created from vector format). Removed the whole check for paths (need to be reintroduced later again, but in a better way then the old one). Renamed package and files to chemical-mime-data (IMHO a better name). Fixed almost all distcheck issues except the one caused by the run of update-mime-database which seems unsolvable (workaround: set ENABLE_UPDATEDB default to 'no'). Removed all obsolete files, fixed the rest. 2005-03-21 Daniel Leidert <daniel.leidert@wgdd.de> * freedesktop.org/chemicalMIME.xml.in: Fixed missing end tag. * kde/Makefile.am: Added a missing MIME type (still not complete). * TODO: Reordered list. 2005-03-20 Daniel Leidert <daniel.leidert@wgdd.de> * chemicalMIME.xml.in: Added a few MIME types, missing patterns, sub-class-of and alias attributes and more detection stuff (chemical/x-pdb, chemical/x-hin, chemical/x-cml). * docs/shared-mime-info-spec.pdf.gz: added spec information. 2005-03-18 Egon Willighagen <e.willighagen@science.ru.nl> * Added MIMEs metioned in Taverna.sf.net User Guide. 2005-03-15 Daniel Leidert <daniel.leidert@wgdd.de> * icons/*: A lot of rework to cover chemical MIME types with icons. * kde/x-cactvs-ascii.desktop.in: Added both by dividing kde/x-cactvs-binary.desktop.in. * kde/x-cactvs-table.desktop.in: Ditto. * kde/x-ncbi-asn1-spec.desktop.in: Removed (seem to be obsolete). * kde/x-ncbi-asn1-ascii.desktop.in: Removed (seem to be obsolete). * kde/x-ncbi-asn1.desktop.in: Changed description a bit. * kde/x-ncbi-asn1-binary.desktop.in: Ditto. * kde/*.desktop.in: Fixed (see above). * gnome/chemicalmime.mime: Ditto. * gnome/chemicalmime.keys: Ditto. * freedesktop.org/chemicalMIME.xml.in: Ditto. Commented out *.dat extension for chemical/x-mopac-input. * configure.ac: Cosmetic fix (change option order and PATH-tests). * TODO: Added comment about ROX MIME handling. 2005-03-15 Daniel Leidert <daniel.leidert@wgdd.de> * INSTALL: GNOME icon installation can be done easier by installing icons into hicolor theme (for GNOME > 2.4). Pixmaps icons are now represented by one icon (should be extended later - this is for now). Some variables changed because auf changes in configure.ac. Renamed options to fit their real need. * README: Ditto. * TODO: Ditto. * configure.ac: Ditto. * icons/hicolor/*: Ditto. * icons/crystalsvg/*: Ditto. * icons/pixmaps: Ditto. 2005-03-11 Daniel Leidert <daniel.leidert@wgdd.de> * README: Begin rewriting (adding info about configure options, basic knowledge about MIME handling). * TODO: Added note about chemical/x-cdx. * configure.ac: Added options to handle theme icon install. Clean up and fix a bug related to intltool. * Makefile.am: Do not clean up all autotools stuff. Removed VERSION from EXTRA_DIST. Added po to SUBDIRS. * icons/Makefile.am: Readded pixmaps subdir. * icons/pixmaps: Ditto. * icons/gnome: Added gnome (theme) subdir. * icons/*/Makefile.am: Fixed renamed theme install path. * gnome/icons: Moved back to icons/pixmaps. * gnome/Makefile.am: Fixed renamed booleans, removed pixmaps subdir. * kde/Makefile.am: Fixed renamed booleans, EXTRA_DIST, CLEANFILES (fix 'make dist' target), non-available x-cdx.desktop(.in). * debian/chemicalmime.dirs: Removed (obsolete). 2005-03-10 Daniel Leidert <daniel.leidert@wgdd.de> * chemicalmime.pc.in: Added pk-config stuff. * Makefile.am: Ditto. * configure.ac: Ditto and some clean-up. * debian/rules: Clean-up autotools run. * debian/control: Added pkg-config stuff. Fix build dependencies (see above). 2005-03-04 Daniel Leidert <daniel.leidert@wgdd.de> * GNOME 2.4 support rewritten with icons support (still to change, because theme-icons can be also installed). 2005-03-03 Daniel Leidert <daniel.leidert@wgdd.de> * **/Makefile.am: Fixed several bugs and issues. * debian/rules: Fixed targets (it should not process the build-target several times). * freedesktop.org/Makefile.am: Now considers --without-freedesktop_org-mime. 2005-03-02 Daniel Leidert <daniel.leidert@wgdd.de> * Clean up directory by removing unnecessary files. * Adding options to configure-script to choose, which support should be installed. * Fixing all related Makefiles. * Moving special stuff in subdiretories to get a better overview for every package part (pixmaps, kde mimelnk files, gnome2.4 mime-info and freedesktop.org shared mime info). * Fix building of the Debian package. # UTF-8