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distrib > Fedora > 15 > i386 > by-pkgid > e1ea84613760185cdbfcdef96fa2c7da > files

R-BSgenome-1.22.0-1.fc15.noarch.rpm

Files

drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/BSgenomeDataPkg-template
-rw-r--r-- 1045 root root /usr/share/R/library/BSgenome/DESCRIPTION
-rw-r--r-- 723 root root /usr/share/R/library/BSgenome/INDEX
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/Meta
-rw-r--r-- 1291 root root /usr/share/R/library/BSgenome/NAMESPACE
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/R
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/doc
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/extdata
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/help
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/html
-rw-r--r-- 438 root root /usr/share/R/library/BSgenome/BSgenomeDataPkg-template/DESCRIPTION
-rw-r--r-- 224 root root /usr/share/R/library/BSgenome/BSgenomeDataPkg-template/NAMESPACE
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/BSgenomeDataPkg-template/R
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/BSgenomeDataPkg-template/inst
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/BSgenomeDataPkg-template/man
-rw-r--r-- 908 root root /usr/share/R/library/BSgenome/BSgenomeDataPkg-template/R/zzz.R
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/BSgenomeDataPkg-template/inst/extdata
-rw-r--r-- 1689 root root /usr/share/R/library/BSgenome/BSgenomeDataPkg-template/man/package.Rd
-rw-r--r-- 1195 root root /usr/share/R/library/BSgenome/Meta/Rd.rds
-rw-r--r-- 1243 root root /usr/share/R/library/BSgenome/Meta/hsearch.rds
-rw-r--r-- 870 root root /usr/share/R/library/BSgenome/Meta/links.rds
-rw-r--r-- 547 root root /usr/share/R/library/BSgenome/Meta/nsInfo.rds
-rw-r--r-- 1029 root root /usr/share/R/library/BSgenome/Meta/package.rds
-rw-r--r-- 332 root root /usr/share/R/library/BSgenome/Meta/vignette.rds
-rw-r--r-- 383 root root /usr/share/R/library/BSgenome/R/BSgenome
-rw-r--r--239024 root root /usr/share/R/library/BSgenome/R/BSgenome.rdb
-rw-r--r-- 3139 root root /usr/share/R/library/BSgenome/R/BSgenome.rdx
-rw-r--r-- 1110 root root /usr/share/R/library/BSgenome/doc/BSgenomeForge.R
-rw-r--r-- 24339 root root /usr/share/R/library/BSgenome/doc/BSgenomeForge.Rnw
-rw-r--r--231698 root root /usr/share/R/library/BSgenome/doc/BSgenomeForge.pdf
-rw-r--r-- 11926 root root /usr/share/R/library/BSgenome/doc/GenomeSearching.R
-rw-r--r-- 27610 root root /usr/share/R/library/BSgenome/doc/GenomeSearching.Rnw
-rw-r--r--214374 root root /usr/share/R/library/BSgenome/doc/GenomeSearching.pdf
-rw-r--r-- 1662 root root /usr/share/R/library/BSgenome/doc/index.html
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab
-rw-r--r-- 14076 root root /usr/share/R/library/BSgenome/extdata/ce2chrM.fa
-rw-r--r-- 1598 root root /usr/share/R/library/BSgenome/extdata/ce2dict0.fa
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/1000genomes
-rw-r--r-- 745 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Amellifera.BeeBase.assembly4-seed
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Amellifera.BeeBase.assembly4-tools
-rw-r--r-- 1215 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Amellifera.UCSC.apiMel2-seed
-rw-r--r-- 1141 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Athaliana.TAIR.01222004-seed
-rw-r--r-- 1247 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Athaliana.TAIR.04232008-seed
-rw-r--r-- 977 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Athaliana.TAIR.TAIR9-seed
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Athaliana.TAIR.TAIR9-tools
-rw-r--r-- 1330 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Btaurus.UCSC.bosTau3-seed
-rw-r--r-- 1497 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Btaurus.UCSC.bosTau4-seed
-rw-r--r-- 1001 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Celegans.UCSC.ce2-seed
-rw-r--r-- 1007 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Celegans.UCSC.ce6-seed
-rw-r--r-- 1294 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Cfamiliaris.UCSC.canFam2-seed
-rw-r--r-- 1453 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Dmelanogaster.UCSC.dm2-seed
-rw-r--r-- 1491 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Dmelanogaster.UCSC.dm3-seed
-rw-r--r-- 1464 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer5-seed
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer5-tools
-rw-r--r-- 1464 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer6-seed
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer6-tools
-rw-r--r-- 1457 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer7-seed
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer7-tools
-rw-r--r-- 6875 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Ecoli.NCBI.20080805-seed
-rw-r--r-- 1587 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Gaculeatus.UCSC.gasAcu1-seed
-rw-r--r-- 1525 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Ggallus.UCSC.galGal3-seed
-rw-r--r-- 1412 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.UCSC.hg17-seed
-rw-r--r-- 1439 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.UCSC.hg18-seed
-rw-r--r-- 1949 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.UCSC.hg19-seed
-rw-r--r-- 1412 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Mmusculus.UCSC.mm8-seed
-rw-r--r-- 1414 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Mmusculus.UCSC.mm9-seed
-rw-r--r-- 1530 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Ptroglodytes.UCSC.panTro2-seed
-rw-r--r-- 1436 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Rnorvegicus.UCSC.rn4-seed
-rw-r--r-- 923 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Scerevisiae.UCSC.sacCer1-seed
-rw-r--r-- 1043 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Scerevisiae.UCSC.sacCer2-seed
-rw-r--r-- 1018 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Scerevisiae.UCSC.sacCer3-seed
-rw-r--r-- 744 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.influenza.NCBI.20100628-seed
-rw-r--r-- 1381 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/ForgeAll.R
-rwxr-xr-x 241 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/bump_seed_version.sh
-rw-r--r-- 925 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/1000genomes/BSgenome.Hsapiens.1000g.b36female-seed
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/1000genomes/BSgenome.Hsapiens.1000g.b36female-tools
-rwxr-xr-x 1739 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/1000genomes/BSgenome.Hsapiens.1000g.b36female-tools/split_human_b36_female.sh
-rw-r--r-- 1062 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Amellifera.BeeBase.assembly4-tools/NOTES.TXT
-rwxr-xr-x 1090 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Amellifera.BeeBase.assembly4-tools/splitbigfasta.sh
-rw-r--r-- 4189 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Athaliana.TAIR.TAIR9-tools/NOTES.TXT
-rw-r--r-- 229 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer5-tools/NOTES.TXT
-rwxr-xr-x 1877 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer5-tools/splitbigfasta.sh
-rw-r--r-- 230 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer6-tools/NOTES.TXT
-rwxr-xr-x 1114 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer6-tools/splitbigfasta.R
-rw-r--r-- 227 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer7-tools/NOTES.TXT
-rwxr-xr-x 1114 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer7-tools/splitbigfasta.R
-rw-r--r-- 3719 root root /usr/share/R/library/BSgenome/help/AnIndex
-rw-r--r-- 65677 root root /usr/share/R/library/BSgenome/help/BSgenome.rdb
-rw-r--r-- 462 root root /usr/share/R/library/BSgenome/help/BSgenome.rdx
-rw-r--r-- 859 root root /usr/share/R/library/BSgenome/help/aliases.rds
-rw-r--r-- 220 root root /usr/share/R/library/BSgenome/help/paths.rds
-rw-r--r-- 10829 root root /usr/share/R/library/BSgenome/html/00Index.html
-rw-r--r-- 2497 root root /usr/share/R/library/BSgenome/html/BSParams-class.html
-rw-r--r-- 10318 root root /usr/share/R/library/BSgenome/html/BSgenome-class.html
-rw-r--r-- 7898 root root /usr/share/R/library/BSgenome/html/BSgenome-utils.html
-rw-r--r-- 4905 root root /usr/share/R/library/BSgenome/html/BSgenomeForge.html
-rw-r--r-- 5711 root root /usr/share/R/library/BSgenome/html/GenomeData-class.html
-rw-r--r-- 3744 root root /usr/share/R/library/BSgenome/html/GenomeDataList-class.html
-rw-r--r-- 3544 root root /usr/share/R/library/BSgenome/html/GenomeDescription-class.html
-rw-r--r-- 1179 root root /usr/share/R/library/BSgenome/html/R.css
-rw-r--r-- 2838 root root /usr/share/R/library/BSgenome/html/available.genomes.html
-rw-r--r-- 3611 root root /usr/share/R/library/BSgenome/html/bsapply.html
-rw-r--r-- 1393 root root /usr/share/R/library/BSgenome/html/gdapply.html
-rw-r--r-- 2613 root root /usr/share/R/library/BSgenome/html/gdreduce.html
-rw-r--r-- 13947 root root /usr/share/R/library/BSgenome/html/getSeq-methods.html
-rw-r--r-- 5326 root root /usr/share/R/library/BSgenome/html/injectSNPs.html