Sophie

Sophie

distrib > Fedora > 16 > i386 > by-pkgid > 134d854b1cee12386392015ea843da1d > files

R-BSgenome-1.20.0-1.fc16.noarch.rpm

Files

drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/BSgenomeDataPkg-template
-rw-r--r-- 1031 root root /usr/share/R/library/BSgenome/DESCRIPTION
-rw-r--r-- 672 root root /usr/share/R/library/BSgenome/INDEX
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/Meta
-rw-r--r-- 1295 root root /usr/share/R/library/BSgenome/NAMESPACE
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/R
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/doc
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/extdata
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/help
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/html
-rw-r--r-- 438 root root /usr/share/R/library/BSgenome/BSgenomeDataPkg-template/DESCRIPTION
-rw-r--r-- 224 root root /usr/share/R/library/BSgenome/BSgenomeDataPkg-template/NAMESPACE
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/BSgenomeDataPkg-template/R
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/BSgenomeDataPkg-template/inst
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/BSgenomeDataPkg-template/man
-rw-r--r-- 908 root root /usr/share/R/library/BSgenome/BSgenomeDataPkg-template/R/zzz.R
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/BSgenomeDataPkg-template/inst/extdata
-rw-r--r-- 1689 root root /usr/share/R/library/BSgenome/BSgenomeDataPkg-template/man/package.Rd
-rw-r--r-- 1182 root root /usr/share/R/library/BSgenome/Meta/Rd.rds
-rw-r--r-- 1227 root root /usr/share/R/library/BSgenome/Meta/hsearch.rds
-rw-r--r-- 868 root root /usr/share/R/library/BSgenome/Meta/links.rds
-rw-r--r-- 549 root root /usr/share/R/library/BSgenome/Meta/nsInfo.rds
-rw-r--r-- 1011 root root /usr/share/R/library/BSgenome/Meta/package.rds
-rw-r--r-- 333 root root /usr/share/R/library/BSgenome/Meta/vignette.rds
-rw-r--r-- 384 root root /usr/share/R/library/BSgenome/R/BSgenome
-rw-r--r--190461 root root /usr/share/R/library/BSgenome/R/BSgenome.rdb
-rw-r--r-- 3107 root root /usr/share/R/library/BSgenome/R/BSgenome.rdx
-rw-r--r-- 1056 root root /usr/share/R/library/BSgenome/doc/BSgenomeForge.R
-rw-r--r-- 24339 root root /usr/share/R/library/BSgenome/doc/BSgenomeForge.Rnw
-rw-r--r--257236 root root /usr/share/R/library/BSgenome/doc/BSgenomeForge.pdf
-rw-r--r-- 12950 root root /usr/share/R/library/BSgenome/doc/GenomeSearching.R
-rw-r--r-- 27610 root root /usr/share/R/library/BSgenome/doc/GenomeSearching.Rnw
-rw-r--r--234007 root root /usr/share/R/library/BSgenome/doc/GenomeSearching.pdf
-rw-r--r-- 697 root root /usr/share/R/library/BSgenome/doc/index.html
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab
-rw-r--r-- 14076 root root /usr/share/R/library/BSgenome/extdata/ce2chrM.fa
-rw-r--r-- 1598 root root /usr/share/R/library/BSgenome/extdata/ce2dict0.fa
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/1000genomes
-rw-r--r-- 745 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Amellifera.BeeBase.assembly4-seed
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Amellifera.BeeBase.assembly4-tools
-rw-r--r-- 1215 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Amellifera.UCSC.apiMel2-seed
-rw-r--r-- 1141 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Athaliana.TAIR.01222004-seed
-rw-r--r-- 1247 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Athaliana.TAIR.04232008-seed
-rw-r--r-- 977 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Athaliana.TAIR.TAIR9-seed
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Athaliana.TAIR.TAIR9-tools
-rw-r--r-- 1330 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Btaurus.UCSC.bosTau3-seed
-rw-r--r-- 1497 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Btaurus.UCSC.bosTau4-seed
-rw-r--r-- 1001 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Celegans.UCSC.ce2-seed
-rw-r--r-- 1007 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Celegans.UCSC.ce6-seed
-rw-r--r-- 1294 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Cfamiliaris.UCSC.canFam2-seed
-rw-r--r-- 1453 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Dmelanogaster.UCSC.dm2-seed
-rw-r--r-- 1491 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Dmelanogaster.UCSC.dm3-seed
-rw-r--r-- 1464 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer5-seed
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer5-tools
-rw-r--r-- 1464 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer6-seed
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer6-tools
-rw-r--r-- 1457 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer7-seed
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer7-tools
-rw-r--r-- 6875 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Ecoli.NCBI.20080805-seed
-rw-r--r-- 1587 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Gaculeatus.UCSC.gasAcu1-seed
-rw-r--r-- 1525 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Ggallus.UCSC.galGal3-seed
-rw-r--r-- 1412 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.UCSC.hg17-seed
-rw-r--r-- 1439 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.UCSC.hg18-seed
-rw-r--r-- 1949 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.UCSC.hg19-seed
-rw-r--r-- 1412 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Mmusculus.UCSC.mm8-seed
-rw-r--r-- 1414 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Mmusculus.UCSC.mm9-seed
-rw-r--r-- 1530 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Ptroglodytes.UCSC.panTro2-seed
-rw-r--r-- 1436 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Rnorvegicus.UCSC.rn4-seed
-rw-r--r-- 923 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Scerevisiae.UCSC.sacCer1-seed
-rw-r--r-- 1043 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Scerevisiae.UCSC.sacCer2-seed
-rw-r--r-- 744 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.influenza.NCBI.20100628-seed
-rw-r--r-- 1342 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/ForgeAll.R
-rwxr-xr-x 241 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/bump_seed_version.sh
-rw-r--r-- 925 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/1000genomes/BSgenome.Hsapiens.1000g.b36female-seed
drwxr-xr-x 4096 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/1000genomes/BSgenome.Hsapiens.1000g.b36female-tools
-rwxr-xr-x 1739 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/1000genomes/BSgenome.Hsapiens.1000g.b36female-tools/split_human_b36_female.sh
-rw-r--r-- 1062 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Amellifera.BeeBase.assembly4-tools/NOTES.TXT
-rwxr-xr-x 1090 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Amellifera.BeeBase.assembly4-tools/splitbigfasta.sh
-rw-r--r-- 4189 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Athaliana.TAIR.TAIR9-tools/NOTES.TXT
-rw-r--r-- 229 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer5-tools/NOTES.TXT
-rwxr-xr-x 1877 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer5-tools/splitbigfasta.sh
-rw-r--r-- 230 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer6-tools/NOTES.TXT
-rwxr-xr-x 1114 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer6-tools/splitbigfasta.R
-rw-r--r-- 227 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer7-tools/NOTES.TXT
-rwxr-xr-x 1114 root root /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer7-tools/splitbigfasta.R
-rw-r--r-- 3725 root root /usr/share/R/library/BSgenome/help/AnIndex
-rw-r--r-- 66236 root root /usr/share/R/library/BSgenome/help/BSgenome.rdb
-rw-r--r-- 455 root root /usr/share/R/library/BSgenome/help/BSgenome.rdx
-rw-r--r-- 858 root root /usr/share/R/library/BSgenome/help/aliases.rds
-rw-r--r-- 216 root root /usr/share/R/library/BSgenome/help/paths.rds
-rw-r--r-- 10877 root root /usr/share/R/library/BSgenome/html/00Index.html
-rw-r--r-- 2421 root root /usr/share/R/library/BSgenome/html/BSParams-class.html
-rw-r--r-- 10187 root root /usr/share/R/library/BSgenome/html/BSgenome-class.html
-rw-r--r-- 7664 root root /usr/share/R/library/BSgenome/html/BSgenome-utils.html
-rw-r--r-- 4833 root root /usr/share/R/library/BSgenome/html/BSgenomeForge.html
-rw-r--r-- 5693 root root /usr/share/R/library/BSgenome/html/GenomeData-class.html
-rw-r--r-- 3755 root root /usr/share/R/library/BSgenome/html/GenomeDataList-class.html
-rw-r--r-- 3497 root root /usr/share/R/library/BSgenome/html/GenomeDescription-class.html
-rw-r--r-- 1179 root root /usr/share/R/library/BSgenome/html/R.css
-rw-r--r-- 2831 root root /usr/share/R/library/BSgenome/html/available.genomes.html
-rw-r--r-- 3584 root root /usr/share/R/library/BSgenome/html/bsapply.html
-rw-r--r-- 1368 root root /usr/share/R/library/BSgenome/html/gdapply.html
-rw-r--r-- 2600 root root /usr/share/R/library/BSgenome/html/gdreduce.html
-rw-r--r-- 14532 root root /usr/share/R/library/BSgenome/html/getSeq.html
-rw-r--r-- 5298 root root /usr/share/R/library/BSgenome/html/injectSNPs.html