| -rw-r--r-- | 2387 | root |
root |
/usr/share/R/library/GenomicFeatures/DESCRIPTION
|
| -rw-r--r-- | 2134 | root |
root |
/usr/share/R/library/GenomicFeatures/INDEX
|
| drwxr-xr-x | 4096 | root |
root |
/usr/share/R/library/GenomicFeatures/Meta
|
| -rw-r--r-- | 2327 | root |
root |
/usr/share/R/library/GenomicFeatures/NAMESPACE
|
| -rw-r--r-- | 3776 | root |
root |
/usr/share/R/library/GenomicFeatures/NEWS
|
| drwxr-xr-x | 4096 | root |
root |
/usr/share/R/library/GenomicFeatures/R
|
| drwxr-xr-x | 4096 | root |
root |
/usr/share/R/library/GenomicFeatures/doc
|
| drwxr-xr-x | 4096 | root |
root |
/usr/share/R/library/GenomicFeatures/extdata
|
| drwxr-xr-x | 4096 | root |
root |
/usr/share/R/library/GenomicFeatures/help
|
| drwxr-xr-x | 4096 | root |
root |
/usr/share/R/library/GenomicFeatures/html
|
| drwxr-xr-x | 4096 | root |
root |
/usr/share/R/library/GenomicFeatures/script
|
| drwxr-xr-x | 4096 | root |
root |
/usr/share/R/library/GenomicFeatures/txdb-template
|
| drwxr-xr-x | 4096 | root |
root |
/usr/share/R/library/GenomicFeatures/unitTests
|
| -rw-r--r-- | 1572 | root |
root |
/usr/share/R/library/GenomicFeatures/Meta/Rd.rds
|
| -rw-r--r-- | 1613 | root |
root |
/usr/share/R/library/GenomicFeatures/Meta/hsearch.rds
|
| -rw-r--r-- | 955 | root |
root |
/usr/share/R/library/GenomicFeatures/Meta/links.rds
|
| -rw-r--r-- | 1110 | root |
root |
/usr/share/R/library/GenomicFeatures/Meta/nsInfo.rds
|
| -rw-r--r-- | 1789 | root |
root |
/usr/share/R/library/GenomicFeatures/Meta/package.rds
|
| -rw-r--r-- | 244 | root |
root |
/usr/share/R/library/GenomicFeatures/Meta/vignette.rds
|
| -rw-r--r-- | 1056 | root |
root |
/usr/share/R/library/GenomicFeatures/R/GenomicFeatures
|
| -rw-r--r-- | 223014 | root |
root |
/usr/share/R/library/GenomicFeatures/R/GenomicFeatures.rdb
|
| -rw-r--r-- | 6078 | root |
root |
/usr/share/R/library/GenomicFeatures/R/GenomicFeatures.rdx
|
| -rw-r--r-- | 5731 | root |
root |
/usr/share/R/library/GenomicFeatures/doc/GenomicFeatures.R
|
| -rw-r--r-- | 18757 | root |
root |
/usr/share/R/library/GenomicFeatures/doc/GenomicFeatures.Rnw
|
| -rw-r--r-- | 235533 | root |
root |
/usr/share/R/library/GenomicFeatures/doc/GenomicFeatures.pdf
|
| -rw-r--r-- | 1246 | root |
root |
/usr/share/R/library/GenomicFeatures/doc/index.html
|
| -rw-r--r-- | 154471 | root |
root |
/usr/share/R/library/GenomicFeatures/extdata/Aedes_aegypti.partial.gtf
|
| -rw-r--r-- | 31744 | root |
root |
/usr/share/R/library/GenomicFeatures/extdata/Biomart_Ensembl_sample.sqlite
|
| -rw-r--r-- | 34816 | root |
root |
/usr/share/R/library/GenomicFeatures/extdata/FeatureDb.sqlite
|
| -rw-r--r-- | 45056 | root |
root |
/usr/share/R/library/GenomicFeatures/extdata/TESTFLYGFF3.sqlite
|
| -rw-r--r-- | 235520 | root |
root |
/usr/share/R/library/GenomicFeatures/extdata/TESTGFF.sqlite
|
| -rw-r--r-- | 64512 | root |
root |
/usr/share/R/library/GenomicFeatures/extdata/TESTGTF.sqlite
|
| -rw-r--r-- | 8121 | root |
root |
/usr/share/R/library/GenomicFeatures/extdata/UCSC_knownGene_sample.rda
|
| -rw-r--r-- | 72704 | root |
root |
/usr/share/R/library/GenomicFeatures/extdata/UCSC_knownGene_sample.sqlite
|
| -rw-r--r-- | 724 | root |
root |
/usr/share/R/library/GenomicFeatures/extdata/UCSC_knownToLocusLink_sample.rda
|
| -rw-r--r-- | 661564 | root |
root |
/usr/share/R/library/GenomicFeatures/extdata/a.gff3
|
| -rw-r--r-- | 59968 | root |
root |
/usr/share/R/library/GenomicFeatures/extdata/cD.exByEdge-SG-Vig.Rda
|
| -rw-r--r-- | 101438 | root |
root |
/usr/share/R/library/GenomicFeatures/extdata/cD.exsByGenes-SG-Vig.Rda
|
| -rw-r--r-- | 56454 | root |
root |
/usr/share/R/library/GenomicFeatures/extdata/dmel-1000-r5.11.filtered.gff
|
| -rw-r--r-- | 1262 | root |
root |
/usr/share/R/library/GenomicFeatures/extdata/events.Rda
|
| -rw-r--r-- | 3539 | root |
root |
/usr/share/R/library/GenomicFeatures/help/AnIndex
|
| -rw-r--r-- | 92770 | root |
root |
/usr/share/R/library/GenomicFeatures/help/GenomicFeatures.rdb
|
| -rw-r--r-- | 668 | root |
root |
/usr/share/R/library/GenomicFeatures/help/GenomicFeatures.rdx
|
| -rw-r--r-- | 889 | root |
root |
/usr/share/R/library/GenomicFeatures/help/aliases.rds
|
| -rw-r--r-- | 325 | root |
root |
/usr/share/R/library/GenomicFeatures/help/paths.rds
|
| -rw-r--r-- | 13428 | root |
root |
/usr/share/R/library/GenomicFeatures/html/00Index.html
|
| -rw-r--r-- | 1306 | root |
root |
/usr/share/R/library/GenomicFeatures/html/DEFAULT_CIRC_SEQS.html
|
| -rw-r--r-- | 2151 | root |
root |
/usr/share/R/library/GenomicFeatures/html/FeatureDb-class.html
|
| -rw-r--r-- | 1179 | root |
root |
/usr/share/R/library/GenomicFeatures/html/R.css
|
| -rw-r--r-- | 5875 | root |
root |
/usr/share/R/library/GenomicFeatures/html/TranscriptDb-class.html
|
| -rw-r--r-- | 3201 | root |
root |
/usr/share/R/library/GenomicFeatures/html/as-format-methods.html
|
| -rw-r--r-- | 11666 | root |
root |
/usr/share/R/library/GenomicFeatures/html/extractTranscriptsFromGenome.html
|
| -rw-r--r-- | 1337 | root |
root |
/usr/share/R/library/GenomicFeatures/html/features.html
|
| -rw-r--r-- | 4246 | root |
root |
/usr/share/R/library/GenomicFeatures/html/getPromoterSeq-methods.html
|
| -rw-r--r-- | 3525 | root |
root |
/usr/share/R/library/GenomicFeatures/html/id2name.html
|
| -rw-r--r-- | 5790 | root |
root |
/usr/share/R/library/GenomicFeatures/html/makeFeatureDbFromUCSC.html
|
| -rw-r--r-- | 9272 | root |
root |
/usr/share/R/library/GenomicFeatures/html/makeTranscriptDb.html
|
| -rw-r--r-- | 7077 | root |
root |
/usr/share/R/library/GenomicFeatures/html/makeTranscriptDbFromBiomart.html
|
| -rw-r--r-- | 6699 | root |
root |
/usr/share/R/library/GenomicFeatures/html/makeTranscriptDbFromGFF.html
|
| -rw-r--r-- | 4797 | root |
root |
/usr/share/R/library/GenomicFeatures/html/makeTranscriptDbFromUCSC.html
|
| -rw-r--r-- | 10061 | root |
root |
/usr/share/R/library/GenomicFeatures/html/makeTxDbPackage.html
|
| -rw-r--r-- | 3322 | root |
root |
/usr/share/R/library/GenomicFeatures/html/regions.html
|
| -rw-r--r-- | 2303 | root |
root |
/usr/share/R/library/GenomicFeatures/html/saveFeatures.html
|
| -rw-r--r-- | 3031 | root |
root |
/usr/share/R/library/GenomicFeatures/html/select-methods.html
|
| -rw-r--r-- | 6166 | root |
root |
/usr/share/R/library/GenomicFeatures/html/transcripts.html
|
| -rw-r--r-- | 6285 | root |
root |
/usr/share/R/library/GenomicFeatures/html/transcriptsBy.html
|
| -rw-r--r-- | 4782 | root |
root |
/usr/share/R/library/GenomicFeatures/html/transcriptsByOverlaps.html
|
| -rw-r--r-- | 5035 | root |
root |
/usr/share/R/library/GenomicFeatures/script/makeTxDbs.R
|
| -rw-r--r-- | 3834 | root |
root |
/usr/share/R/library/GenomicFeatures/script/maketRNAFDb.R
|
| -rw-r--r-- | 449 | root |
root |
/usr/share/R/library/GenomicFeatures/txdb-template/DESCRIPTION
|
| -rw-r--r-- | 214 | root |
root |
/usr/share/R/library/GenomicFeatures/txdb-template/NAMESPACE
|
| drwxr-xr-x | 4096 | root |
root |
/usr/share/R/library/GenomicFeatures/txdb-template/R
|
| drwxr-xr-x | 4096 | root |
root |
/usr/share/R/library/GenomicFeatures/txdb-template/inst
|
| drwxr-xr-x | 4096 | root |
root |
/usr/share/R/library/GenomicFeatures/txdb-template/man
|
| -rw-r--r-- | 502 | root |
root |
/usr/share/R/library/GenomicFeatures/txdb-template/R/zzz.R
|
| drwxr-xr-x | 4096 | root |
root |
/usr/share/R/library/GenomicFeatures/txdb-template/inst/extdata
|
| -rw-r--r-- | 1015 | root |
root |
/usr/share/R/library/GenomicFeatures/txdb-template/man/package.Rd
|
| -rw-r--r-- | 5350 | root |
root |
/usr/share/R/library/GenomicFeatures/unitTests/test_getPromoterSeq-methods.R
|
| -rw-r--r-- | 518 | root |
root |
/usr/share/R/library/GenomicFeatures/unitTests/test_makeIdsForUniqueDataFrameRows.R
|
| -rw-r--r-- | 3418 | root |
root |
/usr/share/R/library/GenomicFeatures/unitTests/test_makeTranscriptDb.R
|
| -rw-r--r-- | 676 | root |
root |
/usr/share/R/library/GenomicFeatures/unitTests/test_makeTranscriptDbFromBiomart.R
|
| -rw-r--r-- | 8469 | root |
root |
/usr/share/R/library/GenomicFeatures/unitTests/test_makeTranscriptDbFromGFF.R
|
| -rw-r--r-- | 1335 | root |
root |
/usr/share/R/library/GenomicFeatures/unitTests/test_makeTranscriptDbFromUCSC.R
|
| -rw-r--r-- | 10747 | root |
root |
/usr/share/R/library/GenomicFeatures/unitTests/test_select-methods.R
|
| -rw-r--r-- | 7614 | root |
root |
/usr/share/R/library/GenomicFeatures/unitTests/test_transcripts.R
|
| -rw-r--r-- | 8782 | root |
root |
/usr/share/R/library/GenomicFeatures/unitTests/test_transcriptsBy.R
|
| -rw-r--r-- | 3860 | root |
root |
/usr/share/R/library/GenomicFeatures/unitTests/test_transcriptsByOverlaps.R
|
