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<div class="section" id="pshistogram">
<span id="index-0"></span><h1>pshistogram<a class="headerlink" href="#pshistogram" title="Permalink to this headline">¶</a></h1>
<p>pshistogram - Calculate and plot histograms</p>
<div class="section" id="synopsis">
<h2>Synopsis<a class="headerlink" href="#synopsis" title="Permalink to this headline">¶</a></h2>
<p><strong>pshistogram</strong> [ <em>table</em> ] <a class="reference internal" href="#j"><span> <strong>-J</strong></span></a></strong><strong>x</strong>|<strong>X</strong><em>parameters</em>
<a class="reference internal" href="#w"><span> <strong>-W</strong></span></a></strong><em>bin_width</em>[<strong>+l</strong>|<strong>h</strong>|<strong>b</strong>]
[ <a class="reference internal" href="#a"><span> <strong>-A</strong></span></a></strong> ]
[ <a class="reference internal" href="#b"><span> <strong>-B</strong></span></a></strong>[<strong>p</strong>|<strong>s</strong>]<em>parameters</em> ]
[ <a class="reference internal" href="#c"><span> <strong>-C</strong></span></a></strong><em>cpt</em> ]
[ <a class="reference internal" href="#d"><span> <strong>-D</strong></span></a></strong>[<strong>+b</strong>][<strong>+f</strong><em>font</em>][<strong>+o</strong><em>off</em>][<strong>+r</strong>] ]
[ <a class="reference internal" href="#f"><span> <strong>-F</strong></span></a></strong> ]
[ <a class="reference internal" href="#g"><span> <strong>-G</strong></span></a></strong><em>fill</em> ] [ <a class="reference internal" href="#j"><span> <strong>-J</strong></span></a></strong><strong>z</strong>|<strong>Z</strong><em>parameters</em> ]
[ <a class="reference internal" href="#i"><span> <strong>-I</strong></span></a></strong>[<strong>o</strong>|<strong>O</strong>] ]
[ <a class="reference internal" href="#k"><span> <strong>-K</strong></span></a></strong> ] [ <a class="reference internal" href="#l"><span> <strong>-L</strong></span></a></strong><em>pen</em> ]
[ <a class="reference internal" href="#n"><span> <strong>-N</strong></span></a></strong>[<em>mode</em>][<strong>+p</strong><em>pen</em>] ]
[ <a class="reference internal" href="#o"><span> <strong>-O</strong></span></a></strong> ] [<a class="reference internal" href="#p"><span> <strong>-P</strong></span></a></strong> ] [ <a class="reference internal" href="#q"><span> <strong>-Q</strong></span></a></strong> ]
[ <a class="reference internal" href="#r"><span> <strong>-R</strong></span></a></strong><em>region</em> ]
[ <a class="reference internal" href="#s"><span> <strong>-S</strong></span></a></strong> ]
[ <a class="reference internal" href="#u"><span> <strong>-U</strong></span></a></strong>[<em>stamp</em>] ]
[ <a class="reference internal" href="#v"><span> <strong>-V</strong></span></a></strong>[<em>level</em>] ]
[ <a class="reference internal" href="#x"><span> <strong>-X</strong></span></a></strong><em>x_offset</em> ]
[ <a class="reference internal" href="#y"><span> <strong>-Y</strong></span></a></strong><em>y_offset</em> ]
[ <a class="reference internal" href="#z"><span> <strong>-Z</strong></span></a></strong>[<em>type</em>][<strong>+w</strong>] ]
[ <strong>-bi</strong><a class="reference internal" href="gmt.html#bi-full"><span class="std std-ref">binary</span></a> ]
[ <strong>-di</strong><a class="reference internal" href="gmt.html#di-full"><span class="std std-ref">nodata</span></a> ]
[ <strong>-e</strong><a class="reference internal" href="gmt.html#e-full"><span class="std std-ref">regexp</span></a> ]
[ <strong>-f</strong><a class="reference internal" href="gmt.html#f-full"><span class="std std-ref">flags</span></a> ]
[ <strong>-h</strong><a class="reference internal" href="gmt.html#h-full"><span class="std std-ref">headers</span></a> ]
[ <strong>-i</strong><a class="reference internal" href="gmt.html#icols-full"><span class="std std-ref">flags</span></a> ]
[ <strong>-p</strong><a class="reference internal" href="gmt.html#perspective-full"><span class="std std-ref">flags</span></a> ]
[ <strong>-t</strong><a class="reference internal" href="gmt.html#t-full"><span class="std std-ref">transp</span></a> ]</p>
<p><strong>Note:</strong> No space is allowed between the option flag and the associated arguments.</p>
</div>
<div class="section" id="description">
<h2>Description<a class="headerlink" href="#description" title="Permalink to this headline">¶</a></h2>
<p><strong>pshistogram</strong> reads <em>file</em> [or standard input] and examines the first
data column (or use <strong>-i</strong>) to calculate histogram parameters based on
the bin-width provided. Using these parameters, scaling, and optional
range parameters it will generate PostScript code that plots a
histogram. A cumulative histogram may also be specified.</p>
</div>
<div class="section" id="required-arguments">
<h2>Required Arguments<a class="headerlink" href="#required-arguments" title="Permalink to this headline">¶</a></h2>
<dl class="docutils" id="j">
<dt><strong>-Jx</strong></dt>
<dd><em>xscale[/yscale]</em> (Linear scale(s) in distance unit/data unit).</dd>
</dl>
<dl class="docutils" id="w">
<dt><strong>-W</strong><em>bin_width</em>[<strong>+l</strong>|<strong>h</strong>|<strong>b</strong>]</dt>
<dd>Sets the bin width used for histogram calculations.
The modifiers specify the handling of extreme values that fall outside the range
set by <strong>-R</strong>. By default these values are ignored. Use <strong>+b</strong> to let
these values be included in the first or last bins. To only include
extreme values below first bin into the first bin, use <strong>+l</strong>, and to
only include extreme values above the last bin into that last bin, use
<strong>+h</strong>.</dd>
</dl>
</div>
<div class="section" id="optional-arguments">
<h2>Optional Arguments<a class="headerlink" href="#optional-arguments" title="Permalink to this headline">¶</a></h2>
<dl class="docutils">
<dt><em>table</em></dt>
<dd>One or more ASCII (or binary, see <strong>-bi</strong>[<em>ncols</em>][<em>type</em>]) data
table file(s) holding a number of data columns. If no tables are given
then we read from standard input. </dd>
</dl>
<dl class="docutils" id="a">
<dt><strong>-A</strong></dt>
<dd>Plot the histogram horizontally from x = 0 [Default is vertically
from y = 0]. The plot dimensions remain the same, but the two
axes are flipped.</dd>
</dl>
<dl class="docutils" id="b">
<dt><strong>-B</strong>[<strong>p</strong>|<strong>s</strong>]<em>parameters</em> <a class="reference internal" href="gmt.html#b-full"><span class="std std-ref">(more ...)</span></a></dt>
<dd>Set map boundary frame and axes attributes.</dd>
</dl>
<dl class="docutils" id="c">
<dt><strong>-C</strong><em>cpt</em></dt>
<dd>Give a CPT. The mid x-value for each bar is used to
look-up the bar color.</dd>
</dl>
<dl class="docutils" id="d">
<dt><strong>-D</strong>[<strong>+b</strong>][<strong>+f</strong><em>font</em>][<strong>+o</strong><em>off</em>][<strong>+r</strong>]</dt>
<dd>Annotate each bar with the count it represents. Append any of the
following modifiers: Use <strong>+b</strong> to place the labels beneath the bars
instead of above; use <strong>+f</strong> to change to another font than the default
annotation font; use <strong>+o</strong> to change the offset between bar and label [6p];
use <strong>+r</strong> to rotate the labels from horizontal to vertical.</dd>
</dl>
<dl class="docutils" id="f">
<dt><strong>-F</strong></dt>
<dd>Center bin on each value. [Default is left edge].</dd>
</dl>
<dl class="docutils" id="g">
<dt><strong>-G</strong><em>fill</em></dt>
<dd>Select filling of bars [Default is no fill].</dd>
</dl>
<dl class="docutils" id="i">
<dt><strong>-I</strong>[<strong>o</strong>|<strong>O</strong>]</dt>
<dd>Inquire about min/max x and y after binning. The <em>xmin xmax ymin
ymax</em> is output; no plotting is done. Append <strong>o</strong> to output an
ASCII table of the resulting x,y data instead. Upper case <strong>O</strong> will
output all x,y bin data even when y == 0.</dd>
</dl>
<dl class="docutils">
<dt><strong>-Jz</strong>|<strong>Z</strong><em>parameters</em> <a class="reference internal" href="gmt.html#jz-full"><span class="std std-ref">(more ...)</span></a></dt>
<dd>Set z-axis scaling; same syntax as <strong>-Jx</strong>.</dd>
</dl>
<dl class="docutils" id="k">
<dt><strong>-K</strong> <a class="reference internal" href="gmt.html#k-full"><span class="std std-ref">(more ...)</span></a></dt>
<dd>Do not finalize the PostScript plot.</dd>
</dl>
<dl class="docutils" id="l">
<dt><strong>-L</strong><em>pen</em></dt>
<dd>Draw bar outline using the specified pen thickness. [Default is no outline].</dd>
</dl>
<dl class="docutils" id="n">
<dt><strong>-N</strong>[<em>mode</em>][<strong>+p</strong><em>pen</em>]</dt>
<dd><p class="first">Draw the equivalent normal distribution; append desired pen [0.5p,black].
The <em>mode</em> selects which central location and scale to use:</p>
<ul class="simple">
<li>0 = mean and standard deviation [Default];</li>
<li>1 = median and L1 scale;</li>
<li>2 = LMS mode and scale.</li>
</ul>
<p class="last">The <strong>-N</strong> option may be repeated to draw several of these curves.</p>
</dd>
</dl>
<dl class="docutils" id="o">
<dt><strong>-O</strong> <a class="reference internal" href="gmt.html#o-full"><span class="std std-ref">(more ...)</span></a></dt>
<dd>Append to existing PostScript plot.</dd>
</dl>
<dl class="docutils" id="p">
<dt><strong>-P</strong> <a class="reference internal" href="gmt.html#p-full"><span class="std std-ref">(more ...)</span></a></dt>
<dd>Select "Portrait" plot orientation.</dd>
</dl>
<dl class="docutils" id="q">
<dt><strong>-Q</strong></dt>
<dd>Draw a cumulative histogram.</dd>
</dl>
<span class="target" id="r"></span><dl class="docutils">
<dt><strong>-R</strong><em>xmin</em>/<em>xmax</em>/<em>ymin</em>/<em>ymax</em>[<strong>+r</strong>][<strong>+u</strong><em>unit</em>] <a class="reference internal" href="gmt.html#r-full"><span class="std std-ref">(more ...)</span></a></dt>
<dd>Specify the region of interest. </dd>
</dl>
<p>For perspective view <strong>p</strong>, optionally append /<em>zmin</em>/<em>zmax</em>. <a class="reference internal" href="gmt.html#rz-full"><span class="std std-ref">(more ...)</span></a> If not given, <strong>pshistogram</strong> will automatically find reasonable values for the region.</p>
<dl class="docutils" id="s">
<dt><strong>-S</strong></dt>
<dd>Draws a stairs-step diagram which does not include the internal bars
of the default histogram.</dd>
</dl>
<dl class="docutils" id="u">
<dt><strong>-U</strong>[[<em>just</em>]/<em>dx</em>/<em>dy</em>/][<strong>c</strong>|<em>label</em>] <a class="reference internal" href="gmt.html#u-full"><span class="std std-ref">(more ...)</span></a></dt>
<dd>Draw GMT time stamp logo on plot.</dd>
</dl>
<span class="target" id="v"></span><dl class="docutils">
<dt><strong>-V</strong>[<em>level</em>] <a class="reference internal" href="gmt.html#v-full"><span class="std std-ref">(more ...)</span></a></dt>
<dd>Select verbosity level [c]. </dd>
</dl>
<p id="x"><strong>-X</strong>[<strong>a</strong>|<strong>c</strong>|<strong>f</strong>|<strong>r</strong>][<em>x-shift</em>[<strong>u</strong>]]</p>
<dl class="docutils">
<dt><strong>-Y</strong>[<strong>a</strong>|<strong>c</strong>|<strong>f</strong>|<strong>r</strong>][<em>y-shift</em>[<strong>u</strong>]] <a class="reference internal" href="gmt.html#xy-full"><span class="std std-ref">(more ...)</span></a></dt>
<dd>Shift plot origin.</dd>
</dl>
<dl class="docutils" id="z">
<dt><strong>-Z</strong>[<em>type</em>][<strong>+w</strong>]</dt>
<dd><p class="first">Choose between 6 types of histograms:</p>
<ul class="simple">
<li>0 = counts [Default]</li>
<li>1 = frequency_percent</li>
<li>2 = log (1.0 + count)</li>
<li>3 = log (1.0 + frequency_percent)</li>
<li>4 = log10 (1.0 + count)</li>
<li>5 = log10 (1.0 + frequency_percent).</li>
</ul>
<p class="last">To use weights provided as a second data column instead of pure counts,
append <strong>+w</strong>.</p>
</dd>
</dl>
<dl class="docutils">
<dt><strong>-bi</strong>[<em>ncols</em>][<strong>t</strong>] <a class="reference internal" href="gmt.html#bi-full"><span class="std std-ref">(more ...)</span></a></dt>
<dd>Select native binary input. [Default is 2 input columns].</dd>
</dl>
<dl class="docutils">
<dt><strong>-di</strong><em>nodata</em> <a class="reference internal" href="gmt.html#di-full"><span class="std std-ref">(more ...)</span></a></dt>
<dd>Replace input columns that equal <em>nodata</em> with NaN. </dd>
</dl>
<dl class="docutils">
<dt><strong>-e</strong>[<strong>~</strong>]<em>"pattern"</em> <strong>|</strong> <strong>-e</strong>[<strong>~</strong>]/<em>regexp</em>/[<strong>i</strong>] <a class="reference internal" href="gmt.html#e-full"><span class="std std-ref">(more ...)</span></a></dt>
<dd>Only accept data records that match the given pattern. </dd>
</dl>
<dl class="docutils">
<dt><strong>-f</strong>[<strong>i</strong>|<strong>o</strong>]<em>colinfo</em> <a class="reference internal" href="gmt.html#f-full"><span class="std std-ref">(more ...)</span></a></dt>
<dd>Specify data types of input and/or output columns. </dd>
</dl>
<dl class="docutils">
<dt><strong>-h</strong>[<strong>i</strong>|<strong>o</strong>][<em>n</em>][<strong>+c</strong>][<strong>+d</strong>][<strong>+r</strong><em>remark</em>][<strong>+r</strong><em>title</em>] <a class="reference internal" href="gmt.html#h-full"><span class="std std-ref">(more ...)</span></a></dt>
<dd>Skip or produce header record(s). </dd>
</dl>
<dl class="docutils">
<dt><strong>-i</strong><em>cols</em>[<strong>+l</strong>][<strong>+s</strong><em>scale</em>][<strong>+o</strong><em>offset</em>][,<em>...</em>] <a class="reference internal" href="gmt.html#icols-full"><span class="std std-ref">(more ...)</span></a></dt>
<dd>Select input columns and transformations (0 is first column).</dd>
</dl>
<dl class="docutils">
<dt><strong>-p</strong>[<strong>x</strong>|<strong>y</strong>|<strong>z</strong>]<em>azim</em>[/<em>elev</em>[/<em>zlevel</em>]][<strong>+w</strong><em>lon0</em>/<em>lat0</em>[/<em>z0</em>]][<strong>+v</strong><em>x0</em>/<em>y0</em>] <a class="reference internal" href="gmt.html#perspective-full"><span class="std std-ref">(more ...)</span></a></dt>
<dd>Select perspective view. </dd>
</dl>
<dl class="docutils">
<dt><strong>-t</strong>[<em>transp</em>] <a class="reference internal" href="gmt.html#t-full"><span class="std std-ref">(more ...)</span></a></dt>
<dd>Set PDF transparency level in percent.</dd>
</dl>
<dl class="docutils">
<dt><strong>-^</strong> or just <strong>-</strong></dt>
<dd>Print a short message about the syntax of the command, then exits (NOTE: on Windows just use <strong>-</strong>).</dd>
<dt><strong>-+</strong> or just <strong>+</strong></dt>
<dd>Print an extensive usage (help) message, including the explanation of
any module-specific option (but not the GMT common options), then exits.</dd>
<dt><strong>-?</strong> or no arguments</dt>
<dd>Print a complete usage (help) message, including the explanation of all options, then exits.</dd>
</dl>
</div>
<div class="section" id="examples">
<h2>Examples<a class="headerlink" href="#examples" title="Permalink to this headline">¶</a></h2>
<p>To draw a histogram of the data v3206.t containing seafloor depths,
using a 250 meter bin width, center bars, and draw bar outline, use:</p>
<blockquote>
<div><div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">gmt</span> <span class="n">pshistogram</span> <span class="n">v3206</span><span class="o">.</span><span class="n">t</span> <span class="o">-</span><span class="n">JXh</span> <span class="o">-</span><span class="n">W250</span> <span class="o">-</span><span class="n">F</span> <span class="o">-</span><span class="n">LP0</span><span class="o">.</span><span class="mi">5</span><span class="n">p</span> <span class="o">-</span><span class="n">V</span> <span class="o">></span> <span class="n">plot</span><span class="o">.</span><span class="n">ps</span>
</pre></div>
</div>
</div></blockquote>
<p>If you know the distribution of your data, you may explicitly specify
range and scales. E.g., to plot a histogram of the y-values (2nd column)
in the file errors.xy using a 1 meter bin width, plot from -10 to +10
meters @ 0.75 cm/m, annotate every 2 m and 100 counts, and use black
bars, run:</p>
<blockquote>
<div><div class="highlight-default notranslate"><div class="highlight"><pre><span></span><span class="n">gmt</span> <span class="n">pshistogram</span> <span class="n">errors</span><span class="o">.</span><span class="n">xy</span> <span class="o">-</span><span class="n">W1</span> <span class="o">-</span><span class="n">R</span><span class="o">-</span><span class="mi">10</span><span class="o">/</span><span class="mi">10</span><span class="o">/</span><span class="mi">0</span><span class="o">/</span><span class="mi">0</span> <span class="o">-</span><span class="n">Jxc</span><span class="o">/</span><span class="mf">0.01</span><span class="n">c</span> \
<span class="o">-</span><span class="n">Bx2</span><span class="o">+</span><span class="n">lError</span> <span class="o">-</span><span class="n">By100</span><span class="o">+</span><span class="n">lCounts</span> <span class="o">-</span><span class="n">Gblack</span> <span class="o">-</span><span class="n">i1</span> <span class="o">-</span><span class="n">V</span> <span class="o">></span> <span class="n">plot</span><span class="o">.</span><span class="n">ps</span>
</pre></div>
</div>
</div></blockquote>
<p>Since no y-range was specified, <strong>pshistogram</strong> will calculate <em>ymax</em> in even
increments of 100.</p>
</div>
<div class="section" id="bugs">
<h2>Bugs<a class="headerlink" href="#bugs" title="Permalink to this headline">¶</a></h2>
<p>The <strong>-W</strong> option does not yet work properly with time series data
(e.g., <strong>-f</strong>0T). Thus, such variable intervals as months and years
are not calculated. Instead, specify your interval in the same units as
the current setting of <strong>TIME_UNIT</strong>.</p>
</div>
<div class="section" id="see-also">
<h2>See Also<a class="headerlink" href="#see-also" title="Permalink to this headline">¶</a></h2>
<p><a class="reference internal" href="gmt.html"><span class="doc">gmt</span></a>, <a class="reference internal" href="gmtcolors.html"><span class="doc">gmtcolors</span></a>,
<a class="reference internal" href="psbasemap.html"><span class="doc">psbasemap</span></a>, <a class="reference internal" href="psrose.html"><span class="doc">psrose</span></a>,
<a class="reference internal" href="psxy.html"><span class="doc">psxy</span></a></p>
</div>
</div>
</div>
</div>
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<h3><a href="index.html">Table Of Contents</a></h3>
<ul>
<li><a class="reference internal" href="#">pshistogram</a><ul>
<li><a class="reference internal" href="#synopsis">Synopsis</a></li>
<li><a class="reference internal" href="#description">Description</a></li>
<li><a class="reference internal" href="#required-arguments">Required Arguments</a></li>
<li><a class="reference internal" href="#optional-arguments">Optional Arguments</a></li>
<li><a class="reference internal" href="#examples">Examples</a></li>
<li><a class="reference internal" href="#bugs">Bugs</a></li>
<li><a class="reference internal" href="#see-also">See Also</a></li>
</ul>
</li>
</ul>
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