- Name: tree-puzzle
- Version: 5.2
- Release: 3mdv2007.0
- Epoch:
- Group: Sciences/Biology
- License: GPL
- Url: http://www.tree-puzzle.de
- Summary: Maximum likelihood analysis for nucleotide, amino acid and two-state data
- Architecture: i586
- Size: 925488
- Distribution: Mandriva Linux
- Vendor: Mandriva
- Packager: Mandriva Linux Team <http://www.mandrivaexpert.com/>
Description:
TREE-PUZZLE is a computer program to reconstruct phylogenetic trees
from molecular sequence data by maximum likelihood. It implements a
fast tree search algorithm, quartet puzzling, that allows analysis
of large data sets and automatically assigns estimations of support
to each internal branch. TREE-PUZZLE also computes pairwise maximum
likelihood distances as well as branch lengths for user specified trees.
In addition, TREE-PUZZLE offers a novel method, likelihood mapping,
to investigate the support of a hypothesized internal branch without
computing an overall tree and to visualize the phylogenetic content
of a sequence alignment.
- OptFlags: -O2 -g -pipe -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fomit-frame-pointer -march=i586 -mtune=pentiumpro -fasynchronous-unwind-tables
- Cookie: n4.mandriva.com 1151230019
- Buildhost: n4.mandriva.com
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