- Name: tree-puzzle
- Version: 5.2
- Release: 3mdv2008.0
- Epoch:
- Group: Sciences/Biology
- License: GPL
- Url: http://www.tree-puzzle.de
- Summary: Maximum likelihood analysis for nucleotide, amino acid and two-state data
- Architecture: x86_64
- Size: 808300
- Distribution: Mandriva Linux
- Vendor: Mandriva
- Packager: Eric Fernandez <zeb@mandriva.org>
Description:
TREE-PUZZLE is a computer program to reconstruct phylogenetic trees
from molecular sequence data by maximum likelihood. It implements a
fast tree search algorithm, quartet puzzling, that allows analysis
of large data sets and automatically assigns estimations of support
to each internal branch. TREE-PUZZLE also computes pairwise maximum
likelihood distances as well as branch lengths for user specified trees.
In addition, TREE-PUZZLE offers a novel method, likelihood mapping,
to investigate the support of a hypothesized internal branch without
computing an overall tree and to visualize the phylogenetic content
of a sequence alignment.
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