%bcond_with internet %bcond_with bootstrap %global packname annotate %global rlibdir %{_libdir}/R/library Name: R-%{packname} Version: 1.32.1 Release: 2 Summary: Annotation for microarrays Group: Sciences/Mathematics License: Artistic-2.0 URL: http://bioconductor.org/packages/release/bioc/html/%{packname}.html Source0: http://bioconductor.org/packages/release/bioc/src/contrib/%{packname}_%{version}.tar.gz Requires: R-AnnotationDbi Requires: R-Biobase R-AnnotationDbi R-DBI R-xtable R-graphics Requires: R-utils R-stats R-methods R-Biobase R-tkWidgets R-XML %if %{without bootstrap} Requires: R-hgu95av2.db R-genefilter R-Biostrings R-rae230a.db Requires: R-rae230aprobe R-GO.db R-org.Hs.eg.db R-org.Mm.eg.db Requires: R-hom.Hs.inp.db %endif BuildRequires: R-devel Rmath-devel texlive-collection-latex R-AnnotationDbi BuildRequires: R-Biobase R-AnnotationDbi R-DBI R-xtable R-graphics R-utils BuildRequires: R-stats R-methods R-Biobase R-tkWidgets R-XML %if %{without bootstrap} BuildRequires: R-hgu95av2.db R-genefilter R-Biostrings R-rae230a.db BuildRequires: R-rae230aprobe R-GO.db R-org.Hs.eg.db R-org.Mm.eg.db BuildRequires: R-hom.Hs.inp.db %endif %description Using R enviroments for annotation. %prep %setup -q -c -n %{packname} %build %install mkdir -p %{buildroot}%{rlibdir} %{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) rm -f %{buildroot}%{rlibdir}/R.css %if %{without bootstrap} %if %{with internet} %check %{_bindir}/R CMD check %{packname} %endif %endif %files %dir %{rlibdir}/%{packname} %doc %{rlibdir}/%{packname}/doc %doc %{rlibdir}/%{packname}/html %doc %{rlibdir}/%{packname}/DESCRIPTION %{rlibdir}/%{packname}/INDEX %{rlibdir}/%{packname}/NAMESPACE %{rlibdir}/%{packname}/Meta %{rlibdir}/%{packname}/R %{rlibdir}/%{packname}/data %{rlibdir}/%{packname}/help %{rlibdir}/%{packname}/misc %changelog * Wed Feb 22 2012 Paulo Andrade <pcpa@mandriva.com.br> 1.32.1-2 + Revision: 778914 - Prepare to rebuild after breaking dependency cycle. * Fri Feb 17 2012 Paulo Andrade <pcpa@mandriva.com.br> 1.32.1-1 + Revision: 775589 - Import R-annotate - Import R-annotate