diff -Naur -x '*~' -x '*.orig' -x '*.rej' bugzilla-3.6-fhs/Bugzilla/Install/Filesystem.pm bugzilla-3.6-fhs-dont-mess-file-perms/Bugzilla/Install/Filesystem.pm
--- bugzilla-3.6-fhs/Bugzilla/Install/Filesystem.pm	2010-04-13 21:07:28.000000000 +0200
+++ bugzilla-3.6-fhs-dont-mess-file-perms/Bugzilla/Install/Filesystem.pm	2010-04-13 21:18:37.000000000 +0200
@@ -113,30 +113,7 @@
 
     # --- FILE PERMISSIONS (Non-created files) --- #
     my %files = (
-        '*'               => { perms => $ws_readable },
-        '*.cgi'           => { perms => $ws_executable },
-        'whineatnews.pl'  => { perms => $ws_executable },
-        'collectstats.pl' => { perms => $ws_executable },
-        'checksetup.pl'   => { perms => $owner_executable },
-        'importxml.pl'    => { perms => $ws_executable },
-        'runtests.pl'     => { perms => $owner_executable },
-        'testserver.pl'   => { perms => $ws_executable },
-        'whine.pl'        => { perms => $ws_executable },
-        'customfield.pl'  => { perms => $owner_executable },
-        'email_in.pl'     => { perms => $ws_executable },
-        'sanitycheck.pl'  => { perms => $ws_executable },
-        'jobqueue.pl'     => { perms => $owner_executable },
-        'migrate.pl'      => { perms => $owner_executable },
-        'install-module.pl' => { perms => $owner_executable },
-
         "$localconfig.old" => { perms => $owner_readable },
-
-        'contrib/README'       => { perms => $owner_readable },
-        'contrib/*/README'     => { perms => $owner_readable },
-        'docs/makedocs.pl'     => { perms => $owner_executable },
-        'docs/style.css'       => { perms => $ws_readable },
-        'docs/*/rel_notes.txt' => { perms => $ws_readable },
-        'docs/*/README.docs'   => { perms => $owner_readable },
         "$datadir/params" => { perms => $ws_writeable },
         "$datadir/old-params.txt" => { perms => $owner_readable },
         "$extensionsdir/create.pl" => { perms => $owner_executable },
@@ -146,8 +123,6 @@
     # recurse through. These are directories we didn't create
     # in checkesetup.pl.
     my %non_recurse_dirs = (
-        '.'  => $ws_dir_readable,
-        docs => $ws_dir_readable,
     );
 
     # This sets the permissions for each item inside each of these 
@@ -162,44 +137,10 @@
                                   dirs => $ws_dir_writeable },
          $webdotdir         => { files => $ws_writeable,
                                   dirs => $ws_dir_writeable },
-         graphs             => { files => $ws_writeable,
-                                  dirs => $ws_dir_writeable },
 
          # Readable directories
          "$datadir/mining"     => { files => $ws_readable,
                                      dirs => $ws_dir_readable },
-         "$libdir/Bugzilla"    => { files => $ws_readable,
-                                     dirs => $ws_dir_readable },
-         $extlib               => { files => $ws_readable,
-                                     dirs => $ws_dir_readable },
-         $templatedir          => { files => $ws_readable,
-                                     dirs => $ws_dir_readable },
-         $extensionsdir        => { files => $ws_readable,
-                                     dirs => $ws_dir_readable },
-         images                => { files => $ws_readable,
-                                     dirs => $ws_dir_readable },
-         css                   => { files => $ws_readable,
-                                     dirs => $ws_dir_readable },
-         js                    => { files => $ws_readable,
-                                     dirs => $ws_dir_readable },
-         $skinsdir             => { files => $ws_readable,
-                                     dirs => $ws_dir_readable },
-         t                     => { files => $owner_readable,
-                                     dirs => $owner_dir_readable },
-         'docs/*/html'         => { files => $ws_readable,
-                                     dirs => $ws_dir_readable },
-         'docs/*/pdf'          => { files => $ws_readable,
-                                     dirs => $ws_dir_readable },
-         'docs/*/txt'          => { files => $ws_readable,
-                                     dirs => $ws_dir_readable },
-         'docs/*/images'       => { files => $ws_readable,
-                                     dirs => $ws_dir_readable },
-         'docs/lib'            => { files => $owner_readable,
-                                     dirs => $owner_dir_readable },
-         'docs/*/xml'          => { files => $owner_readable,
-                                     dirs => $owner_dir_readable },
-         'contrib'             => { files => $owner_executable,
-                                     dirs => $owner_dir_readable, },
     );
 
     # --- FILES TO CREATE --- #
@@ -212,10 +153,7 @@
         "$datadir/extensions"   => $ws_dir_readable,
         $attachdir              => $ws_dir_writeable,
         $extensionsdir          => $ws_dir_readable,
-        graphs                  => $ws_dir_writeable,
         $webdotdir              => $ws_dir_writeable,
-        "$skinsdir/custom"      => $ws_dir_readable,
-        "$skinsdir/contrib"     => $ws_dir_readable,
     );
 
     # The name of each file, pointing at its default permissions and